Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq50 284 1e-71 >seq50 Length=202051 Score = 284 bits (314), Expect = 1e-71 Identities = 1082/1666 (65%), Gaps = 47/1666 (3%) Strand=Plus/Plus Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783 ||||||| |||||| || || ||| ||||| |||||||| | | || | || | Sbjct 87811 TACTTTGGCTTCAAGACCCTCGAGCGTTCGTATCTCCTCAAACTCAACGGTAAAGTCGTC 87870 Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843 ||||| || || || |||||||||| ||||| | || || || || |||| | Sbjct 87871 GAGCGGCCACAGCACATGCTGATGCGTGTCGCTGTTGGCATCTGGGGGGACAACATCGAG 87930 Query 93844 AATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACC 93903 | ||| | | | | || ||||| ||||| | || || | || || Sbjct 87931 AGGGTTCTTGAGACCTACAACTACATGTCCAACAAGTTCTTCACACACGCGTCGCCAACG 87990 Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT-GATGACGAACAA 93962 |||||||| || || || || | | ||| |||| ||||| ||||| | |||| | || Sbjct 87991 CTGTTCAATGCCGGCACGCCTCAGGCGCAGTTGTCGTCGTGCTTCCTCGTTGAC-ATGAA 88049 Query 93963 GGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATA 94022 || ||| ||| || || | || | ||| ||| |||||| | ||||| || Sbjct 88050 GGAGGACAGCATTGAGGGCATCTATGATACCCTGAAGACCTGTGCCATGATCTCCAAGAT 88109 Query 94023 CGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGG 94082 || || || || || ||| |||||| | | ||||||| || ||||||||| || Sbjct 88110 GGCTGGAGGCATTGGCCTCAACGTCCACCGCATCCGTGCCACCGGCTCCTACATCGCTGG 88169 Query 94083 TACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCG 94142 ||||| ||||| ||||| ||| || |||||||| | || |||||||||||| | || || Sbjct 88170 CACCAACGGCACGTCCAATGGCATCATCCCTATGTTGCGTGTCTTCAACAACACTGCCCG 88229 Query 94143 CTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTG 94202 ||||| || |||||||| | | | ||| |||| || |||| || ||||| || Sbjct 88230 ATACGTCGATCAGGGTGGCAATAAGCGCCCCGGTGCTTTTGCCATCTACCTGGAGCCATG 88289 Query 94203 GCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAG 94262 |||||| || || | ||| |||||||||| ||||||||||| || || || | Sbjct 88290 GCACGCTGATGTCTTCGAGTTCCTCGACCTGCGGAAGAACCACGGAAAGGAAGAGGTCCG 88349 Query 94263 GGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAA 94322 || | ||||||||| || |||||| | || || || || ||||| || || ||||| Sbjct 88350 TGCTCGTGACCTCTTCCTTGCCCTCTGGATCCCGGATCTCTTCATGAAGCGTGTAGAGAA 88409 Query 94323 AAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGG 94382 ||| || ||||| ||| | || ||||| || || ||||| || ||||| | || Sbjct 88410 GAACGGCGACTGGACTCTGATGTGCCCCAACGAGTGCCCCGGCCTTGCCGACTGCTACGG 88469 Query 94383 ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGC-AGGG-CAAGGCCAGGAAGGTT 94440 | || || | |||| | |||| | ||| |||| | ||||| ||| Sbjct 88470 CGAGGAGTTCGAGGCTCTGTACGAGAAGTACG-AGCGCGAGGGTCGCGGCCA-AAAGACC 88527 Query 94441 ATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCC 94500 || | || |||||| ||| || ||| | || | || ||||| || | ||| Sbjct 88528 CTGAAGGCGCAGAAGCTCTGGTATGCCATCCTCGAGGCTCAAACCGAGACAGGCAACCCC 88587 Query 94501 TACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATC 94560 | ||| |||| |||||| | |||| |||| ||||||| || |||| || || Sbjct 88588 TTCATGTTGTACAAGGATCACGCCAACCGCAAGAGCAACCAGAAGAACCTTGGCACCATT 88647 Query 94561 AAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTG 94620 ||||| || || ||||| ||||| |||||||| || |||| || ||| ||||||| Sbjct 88648 CGCAGCTCCAACCTTTGCACTGAGATCATCGAGTATTCTGCTCCTGATGAGGTTGCTGTC 88707 Query 94621 TGTAACCTGGGCTCCATCAACCTGTCCAC-TTTCGTGCGA----GATGCCTACACGTCTA 94675 || ||||||| || ||| |||| |||| ||||| ||| || | | || ||| Sbjct 88708 TGCAACCTGGCGTCTATCGCCCTG-CCACAGTTCGT-CGACTACGA-GAATGAGCG-CTA 88763 Query 94676 CTGCTTC--GTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAACCT 94733 |||| ||| ||| | || || | | | || | | || ||||| Sbjct 88764 TAACTTCCAGTT---GCTGCACGA---AGTCA----CCCAGGTCG--TCGTTCGCAACCT 88811 Query 94734 GAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAA 94793 ||||| | | ||||| | ||| ||| || || |||||||| || ||| || Sbjct 88812 GAACAAGATCATCGATATCAACCACTATCCTGTTCCGGAGGCCCGCAAGAGCAACATGCG 88871 Query 94794 GCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCT 94853 || || || || ||| | |||||||||||| | || || || | || | || | Sbjct 88872 CCACCGTCCTATTGGCGTGGGCGTCCAGGGTCTGGCCGATGCTTTCTTGGCCCTCCGCAT 88931 Query 94854 GCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTA 94913 ||| | ||| || || || | |||| | | || ||||| | ||| || | Sbjct 88932 GCCTTTCGAGTCACCTGAGGCTCGTGAGCTGAACAAGCAGATCTTCGAGACCATCTACCA 88991 Query 94914 CGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCGTT 94973 || ||| | | ||| || | |||| || | || || || ||| | Sbjct 88992 CGCCGCCCTCACCGCATCGTGTGACATTGCCA---AGGTTGATGGCCCCTACTCATCATA 89048 Query 94974 CCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGG---GGTGTGAAGCC 95030 | ||||| ||| | ||||| || | |||| |||| | ||| ||| ||||| Sbjct 89049 CGAGGGATCTCCCGTCTCCCAGGGTATCCTGCAGTACGACATGTGGAACAATGTCAAGCC 89108 Query 95031 CTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAA 95090 ||| | ||| | |||||||| || | || | | | | |||||||| || Sbjct 89109 CTCTGATCTCTGGGACTGGGACGCCTTGAAGGCCAAGATCAAGCAGCACGGTGTCCGCAA 89168 Query 95091 CGCGCTGCTTG-TGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACG 95149 | ||| ||| |||| ||||||||||| ||||| || |||||||||| |||||||||| Sbjct 89169 C-AGCTTGTTGATGGCGCCCATGCCCACTGCCTCGACTTCGCAGATCCTGGGCAACAACG 89227 Query 95150 AGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCC 95209 ||| || || |||| || |||||| | || | | || |||||||| || || |||| Sbjct 89228 AGTGCTTTGAGCCCTATACATCCAACATCTATCAGCGCCGCGTGCTCGCTGGCGAGTTCC 89287 Query 95210 CCGTCATCAA--CAAGCACCTCCTACGGGACCTGACGTCTCTG-GGTGTGTGGGGTGACA 95266 || |||| || | || || ||| ||| | | || ||| ||||| ||| Sbjct 89288 AAGTTGTCAATCCATG--GCTGCTCAAGGATCTGGTG-CAGTGTGGTCTGTGGTCTGAGG 89344 Query 95267 AGGTCAAGAACCAACTGCTACGC-GCCAACGGCTCCGTCCAGAACATCCCGCA-AATACC 95324 | | ||||||| | | ||| | | ||||| ||||||| || |||| || || Sbjct 89345 ACCTGAAGAACC-GCATCATCGCTGAGGATGGCTCTATCCAGAATAT-TCGCAGCATCCC 89402 Query 95325 GGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG 95370 || ||||||||||| |||||||||||||| ||||||||| ||||| Sbjct 89403 AGATGACATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCGCAG 89448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494717300425840