Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq50 208 8e-49 seq104 120 3e-22 seq42 104 2e-17 >seq50 Length=202051 Score = 208 bits (230), Expect = 8e-49 Identities = 966/1515 (64%), Gaps = 46/1515 (3%) Strand=Plus/Minus Query 153030 TTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAGGT 153089 ||||| ||||| |||||||| || | ||| || | | ||| | ||| || | || Sbjct 89297 TTGACAACTTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGC 89238 Query 153090 TCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACC 153149 |||||| | ||||| ||||| || || || | || | || || |||||| ||||| | Sbjct 89237 TCAAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATC 89178 Query 153150 AACAAAGAATTCCGCAAGCCGTGC-GCTCGAATGTCGTCCTTCAACGCCTGCCAATCCCA 153208 ||||| || || | |||||| ||| || | | | ||||||| || | ||| ||||| Sbjct 89177 AACAAGCTGTTGCGGACACCGTGCTGCTTGA-TCTTGGCCTTCAAGGCGTCCCAGTCCCA 89119 Query 153209 CAGCGCCGACGGTGTCGC---GTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGG 153265 || | || || | | |||||||||||||||||| | | || | | |||| Sbjct 89118 GAGATCAGAGGGCTTGACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGG 89059 Query 153266 ACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAG 153325 | || | | | |||| ||| || | ||| | || || || ||| Sbjct 89058 AGATCCCTCGTATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAG 88999 Query 153326 CGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTC 153385 ||| | | ||| ||||| ||| ||| || || || || | || || ||| Sbjct 88998 GGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACTC 88939 Query 153386 GTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGG 153445 | | |||||||| || || || || |||||||||||||||| || ||||| || || Sbjct 88938 GAAAGGCATGCGGAGGGCCAAGAAAGCATCGGCCAGACCCTGGACGCCCACGCCAATAGG 88879 Query 153446 TCGATGCTTCTCGTTGCTGCGCCTCGCG---CTC-GCTATGGGATAGTGATTGCGATCGA 153501 || || | |||||| || ||| ||| | | |||||||| ||| ||||| Sbjct 88878 ACGGTGGCGCATGTTGCT----CTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCGA 88823 Query 153502 TAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCAT 153561 | || ||||| |||||||| || || || | || | | | || || ||| | || Sbjct 88822 TGATCTTGTTCAGGTTGCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGTTAT 88763 Query 153562 AGG--TCATT-TCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGA 153618 || ||||| |||| | || ||| | | || ||| ||||||||||| || |||| Sbjct 88762 AGCGCTCATTCTCGTAGTCG---ACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGA 88706 Query 153619 CGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTA 153678 | || ||| || | | |||| | |||||| | ||| |||||| || | Sbjct 88705 CAGCAACCTCATCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAA 88646 Query 153679 TGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCG-TCTTTGAAGAGCATGTAC 153737 || ||| | || | ||| ||||| ||||| ||| || | || ||| | | |||| | Sbjct 88645 TGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGG-CGTGATCCTTGTACAACATGAAG 88587 Query 153738 GGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGTCCTGCGCTCGC 153794 || ||| |||||| ||| | |||| ||| | ||| || | |||||| | Sbjct 88586 GGGTTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGC---TTCTGCGCCTTC 88530 Query 153795 ACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCG 153854 | || | ||| ||||||| |||||| ||||||||| ||| ||||| ||| Sbjct 88529 AGGGTCTTTTGGCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCG 88470 Query 153855 CCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCG 153914 |||||||||||||| |||||||| |||| | || |||||||| | ||| |||| Sbjct 88469 CCGTAGCAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCA------GTCG 88416 Query 153915 GCGTT------GACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCG 153968 |||| || || |||||| |||||||| | |||||| || | |||||| Sbjct 88415 CCGTTCTTCTCTACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCA 88356 Query 153969 CGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGA-GCACGCTATAGATGTC 154027 || || | || ||| || ||| ||| | || | || | | ||| || Sbjct 88355 CGAGCACGGACCTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGA-AGACATC 88297 Query 154028 GGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATC 154084 |||||||| || || | ||||| ||| | ||||| ||| || || |||||||| Sbjct 88296 AGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATC 88237 Query 154085 GACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCC 154144 ||||| || | | ||||||||||| |||| ||| || | ||| | | ||||| Sbjct 88236 GACGTATCGGGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCC 88177 Query 154145 GTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCC 154204 |||||| | ||| | | |||| ||| || | | || ||||| | ||||||||| Sbjct 88176 GTTGGTGCCAGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGGCCAATGCC 88117 Query 154205 GCC-GCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGC 154263 || ||| | ||| || || || ||| ||| || |||||||| || |||| Sbjct 88116 TCCAGCCAT-CTTGGAGATCATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGC 88058 Query 154264 TATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCG 154323 | || || | | | | | ||| ||||| ||| |||| |||| || || Sbjct 88057 TGTCCTCCTTCATGTCAACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCAT 87998 Query 154324 AAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGA 154383 || || || || |||||| || || | || | | ||| | ||| || || | Sbjct 87997 TGAACAGCGTTGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAA 87938 Query 154384 TGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCG 154443 | ||||| | || || ||||| | ||||| ||||| ||||||||||| | Sbjct 87937 GAACCCTCTCGATGTTGTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTG 87878 Query 154444 GACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGGTTTTGTAAC 154503 | || ||| ||||| || || | || | |||||| | |||||||| ||| | | Sbjct 87877 GCCGCTCGACGACTTTACCGTTGAGTTTGAGGAGATACGAACGCTCGAGGGTCTTGAAGC 87818 Query 154504 CGAAATACTTGTATT 154518 | || || | |||| Sbjct 87817 CAAAGTATTGATATT 87803 >seq104 Length=128129 Score = 120 bits (132), Expect = 3e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| || ||| || |||||| || || || |||| Sbjct 59690 GACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCCTCAAGCTGCTTTCCGGCG 59749 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| || |||||||| ||||| || ||||| ||| || || | Sbjct 59750 AAGATGAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACG 59809 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| |||||||||||||| || | || || || || ||||| || Sbjct 59810 TTGTCGATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTG 59869 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 59870 ACGAAGATCTGCAT 59883 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||||| || || || | | |||||||| |||||||||||||| | Sbjct 59429 CCACCACGCAGACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGAC 59488 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||| || || || || || | |||| |||||||| ||||| || || Sbjct 59489 AGCGTCCGGCCGTCTTCCAGCTGCTTGCCCGCGAAGATAAGACGCTGCTGGTCTGGGGGA 59548 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| ||| | || | || | ||| || | || || | || |||| Sbjct 59549 ATACCCTCCTTGTC-TTGAATCTTGGCCTTCACGTTG-TCGATCGTATCCGATGATTCCA 59606 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | ||| || || ||||| || || || || || ||||| Sbjct 59607 CCTCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 59655 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| |||| ||| | || | || | | |||||||| || |||||||||||| Sbjct 59885 CCGCCACGCAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAG 59944 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||||| || ||||| | | || || ||||| ||||||||||| Sbjct 59945 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGG 60004 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | |||| || | |||||| | ||||| || Sbjct 60005 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG-TCGATGGTGTCAGAGGACTCGAC 60063 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || || || || || || || || |||||||| Sbjct 60064 CTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 60111 >seq42 Length=213763 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| |||| || | || | | | |||||||| || |||||||||||| Sbjct 68278 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 68219 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||||||| || || || | |||| || ||||||||||| || || Sbjct 68218 AGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGA 68159 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || ||||| ||| || || | ||||| | | |||||||| |||||||| Sbjct 68158 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGT-CGATGGTGTCGGAAGACTCCAC 68100 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || || || || || || || || || ||||||||| Sbjct 68099 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 68051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496256482070880