Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq50 111 3e-19
>seq50
Length=202051
Score = 111 bits (122), Expect = 3e-19
Identities = 444/684 (65%), Gaps = 15/684 (2%)
Strand=Plus/Minus
Query 203839 CTTGTCCACCGTGAACTGAAT-GGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATG 203896
|| ||| || ||||||||||| |||| | || ||||| | | || |||||||||
Sbjct 89646 CTGGTCGACTGTGAACTGAATCGGCGCTGCCGCT--GCCTGTGTGCGGAGGTAGTACATG 89589
Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956
|| ||||| || ||| || ||| ||| | ||||||| || | |||| ||
Sbjct 89588 CCAGTCTTGAGACCCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAA 89529
Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGC 204015
|| || |||||| |||||||| |||||| ||||||||| ||||| || ||||| ||
Sbjct 89528 GGCTCACGCATGTGTATGTTCAGCGACTGGGACTGGTCGATG-AAGGCACCACGATCGGC 89470
Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGT 204075
||||| | | |||||| ||||||| |||||||| || |||||| | | | | || |
Sbjct 89469 AGCCATCTGCACGATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGAT 89410
Query 204076 GTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134
|| | || | || | | | || ||| ||||| | || || || | | ||
Sbjct 89409 GTCATCTGGGA-TGCTGCGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCT 89351
Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTG-ATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193
|| ||||| ||||| | ||| ||| | ||| ||| | ||| || ||||
Sbjct 89350 TCAGGTCCTCAGACCACA-GACCACACTGCACCAGATCCTTGAGCAGCCATGGATTGACA 89292
Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGA-ACAGGTTGTTGGTGAATGGTTCGAA 204252
| || || || || | ||||| | | | ||| | | |||| || | || || ||
Sbjct 89291 ACTTGGAACTCGCCAGCGAGCACGCGGC-GCTGATAGATGTTGGATGTATAGGGCTCAAA 89233
Query 204253 CGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAG 204312
|||||||||||| | ||||| | || ||| ||||||||||| |||| | ||
Sbjct 89232 GCACTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAA 89173
Query 204313 GGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGC 204372
| |||||| ||||||| | | || | || ||||| | | |||||| | |
Sbjct 89172 GCTGTTGCGGACACCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCCAGAGATC 89113
Query 204373 ACTGGGTTTCAC---GCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCC 204429
| ||| || || | |||||||||| |||| | ||| || || ||| || ||
Sbjct 89112 AGAGGGCTTGACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGGAGATCC 89053
Query 204430 CTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTG 204489
|| ||| | | || || ||| | | || | | ||||| |||| | ||||
Sbjct 89052 CTCGTATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGGGCGGC 88993
Query 204490 ATAGTACATGGTCTCAAAGATCTG 204513
| ||| |||||||| ||||||||
Sbjct 88992 GTGGTAGATGGTCTCGAAGATCTG 88969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795145717774240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |