Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq50 111 3e-19 >seq50 Length=202051 Score = 111 bits (122), Expect = 3e-19 Identities = 444/684 (65%), Gaps = 15/684 (2%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAAT-GGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATG 203896 || ||| || ||||||||||| |||| | || ||||| | | || ||||||||| Sbjct 89646 CTGGTCGACTGTGAACTGAATCGGCGCTGCCGCT--GCCTGTGTGCGGAGGTAGTACATG 89589 Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956 || ||||| || ||| || ||| ||| | ||||||| || | |||| || Sbjct 89588 CCAGTCTTGAGACCCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAA 89529 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGC 204015 || || |||||| |||||||| |||||| ||||||||| ||||| || ||||| || Sbjct 89528 GGCTCACGCATGTGTATGTTCAGCGACTGGGACTGGTCGATG-AAGGCACCACGATCGGC 89470 Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGT 204075 ||||| | | |||||| ||||||| |||||||| || |||||| | | | | || | Sbjct 89469 AGCCATCTGCACGATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGAT 89410 Query 204076 GTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134 || | || | || | | | || ||| ||||| | || || || | | || Sbjct 89409 GTCATCTGGGA-TGCTGCGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCT 89351 Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTG-ATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || ||||| ||||| | ||| ||| | ||| ||| | ||| || |||| Sbjct 89350 TCAGGTCCTCAGACCACA-GACCACACTGCACCAGATCCTTGAGCAGCCATGGATTGACA 89292 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGA-ACAGGTTGTTGGTGAATGGTTCGAA 204252 | || || || || | ||||| | | | ||| | | |||| || | || || || Sbjct 89291 ACTTGGAACTCGCCAGCGAGCACGCGGC-GCTGATAGATGTTGGATGTATAGGGCTCAAA 89233 Query 204253 CGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAG 204312 |||||||||||| | ||||| | || ||| ||||||||||| |||| | || Sbjct 89232 GCACTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAA 89173 Query 204313 GGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGC 204372 | |||||| ||||||| | | || | || ||||| | | |||||| | | Sbjct 89172 GCTGTTGCGGACACCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCCAGAGATC 89113 Query 204373 ACTGGGTTTCAC---GCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCC 204429 | ||| || || | |||||||||| |||| | ||| || || ||| || || Sbjct 89112 AGAGGGCTTGACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGGAGATCC 89053 Query 204430 CTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTG 204489 || ||| | | || || ||| | | || | | ||||| |||| | |||| Sbjct 89052 CTCGTATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGGGCGGC 88993 Query 204490 ATAGTACATGGTCTCAAAGATCTG 204513 | ||| |||||||| |||||||| Sbjct 88992 GTGGTAGATGGTCTCGAAGATCTG 88969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795145717774240