Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq86 147 2e-30
seq42 145 8e-30
seq104 138 1e-27
seq8 96.9 3e-15
>seq86
Length=153077
Score = 147 bits (162), Expect = 2e-30
Identities = 332/486 (68%), Gaps = 20/486 (4%)
Strand=Plus/Minus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAA-ATGAGCGTCATAAAATCCAAGGGGTT 132683
||||| || || || || || ||| |||||| | ||| | ||| || || || |||||
Sbjct 136648 TTCTCGAAGAAGTTGGTCTT-CCCGCCAAGGGAGATGTTCTCCATGAAGTCGAAAGGGTT 136590
Query 132684 GGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAA 132740
| | |||||| ||| | |||||| || ||||||| || | |||||| |||||
Sbjct 136589 AGTAGACTTGTAGATCTTCTCGTTGCCGAG-AG--CGACGAGGAGACGGTCGGCGACGAA 136533
Query 132741 CTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCAC-CGGCAGCGCTT 132799
|||||||| ||| ||| | | ||| | || ||||| |||| ||||| || |
Sbjct 136532 TTCGATGTACTGCTTCATCAAGTTGGCATTCATGCCGAGCAGG-GCACACGGCAAGGCCT 136474
Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGAT---TTCCCTAACGCGCG 132856
|||| || || | ||| ||||| || || ||||| | ||| |||| ||||||
Sbjct 136473 CGGTCAGGAACTCCTTCTCAATGGCAACAGCATCGGTAATGATGGCTTCC---ACGCGCT 136417
Query 132857 CCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGC 132916
| ||| || || | || || ||||| |||||| || ||||| |||| |
Sbjct 136416 GCTTGCTGGGGCGGTTGTTCAGGTGTGAGAACAGCAAGCAGGCGAAGTCAGTGTGCAGAC 136357
Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976
||||||| | || |||||||||||| ||| |||| ||| ||||| || || || || |
Sbjct 136356 CCTCGTCACGAGAGATGAGTTCGTTGGAGAAGGTCAGGCCAGGCATCAGACCACGCTTCT 136297
Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036
| ||||| || |||| |||||| ||| ||||| | || ||||| || || || |
Sbjct 136296 TCAGCCAGAAGATGGAAGCGAAAGCGCCACTGAAGAAAATACCTTCGACAGCAGCAAATG 136237
Query 133037 CCACCAGGCGCTCGCCGAACGT-GGCT-TCTTTGCTGGCGATCCAGCGCAGCGCCCATTC 133094
| || ||||||| || | || | || | | ||| |||||| | ||| ||||| ||
Sbjct 136236 CAACAAGGCGCTGAGCGTAGGTAGACTCACGGTCCTG--GATCCACCTCAGAGCCCAGTC 136179
Query 133095 GGCCTT 133100
||||||
Sbjct 136178 GGCCTT 136173
Score = 131 bits (144), Expect = 2e-25
Identities = 178/248 (72%), Gaps = 3/248 (1%)
Strand=Plus/Minus
Query 133195 TCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACC 133254
|| ||||| | ||||||||| | | || |||||||| || || || ||||| | |
Sbjct 136021 TCGGAGTGGATGTTCTCCATCATGGTCTGGAAGCCGTAGAAACAACGGGCCTCAGGAATC 135962
Query 133255 TGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCG 133314
|| || || | ||| ||||||| || |||||||| ||||||||||| |||||
Sbjct 135961 TGGACCTCAGCACTGAAGCGCTCGATCAAGTTTTCGTTAACGATGCCGTCCGAAGCGGCA 135902
Query 133315 AAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAG 133371
|| ||||| || | ||| |||||| | ||||| ||| |||| || | ||||
Sbjct 135901 AAGAAGGCGAGGATGTGGGAGATGAAGTATTTCTCGTCATCGGTCAAACGGTTGTTCCAG 135842
Query 133372 TCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTT 133431
||| || |||||| |||||||| | |||||| ||||||| || ||||||||| ||
Sbjct 135841 TCGTGCAGGTCCTTAGACAGGTCAATCTCCTCAGCGGTCCAGAAGGACGCCTCGTGCTTC 135782
Query 133432 TTGTACAT 133439
||||||||
Sbjct 135781 TTGTACAT 135774
>seq42
Length=213763
Score = 145 bits (160), Expect = 8e-30
Identities = 161/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||||||||| || |||||| | || || ||| | ||
Sbjct 68052 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCC 68111
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| ||||| |||||| | ||||||
Sbjct 68112 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAA 68171
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||| ||||| ||||| || |||| || |||||| ||||||||||
Sbjct 68172 CAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTACAAC 68231
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| ||||| | || ||||| |||| |||||
Sbjct 68232 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCG 68266
>seq104
Length=128129
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || |||||||| || |||||| |||| || || | |
Sbjct 59655 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCATCG 59596
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | |||| | || | || || | ||||| ||||| |||||| | |||||
Sbjct 59595 GATACGATCGACAACG-TGAAGGCCAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCA 59537
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | ||||||||| |||||||| |||| || || || ||||||||
Sbjct 59536 GCAGCGTCTTATCTTCGCGGGCAAGCAGCTGGAAGACGGCCGGACGCTGTCTGACTACAA 59477
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||| || ||||| |||||||||| |||||||||||| || | || ||
Sbjct 59476 CATTCAGAAGGAGTCGACGCTGCACTTGGTGCTGCGTCTGCGTGGTGG 59429
Score = 136 bits (150), Expect = 4e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || ||||| ||||| |||||||| | || |||||| ||
Sbjct 60114 AAGATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCC 60055
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | | | | | || | || |||| ||||| ||||| || || | |||
Sbjct 60054 TCTGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGAC 59995
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| || |||| ||| || || ||||| || || | ||||||||| |||||||
Sbjct 59994 CAGCAGCGCCTGATTTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTAC 59935
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||| ||||| ||||||| || | || || ||| || | |||||
Sbjct 59934 AACATCCAGAAGGAGTCGACGCTCCACCTCGTCCTCCGTCTGCGTGGCGG 59885
Score = 123 bits (136), Expect = 2e-23
Identities = 159/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| ||||||||| |||| || ||| | ||
Sbjct 59883 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCC 59824
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| ||||| || || | || ||
Sbjct 59823 GACACCATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCA 59765
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| || || ||||| || |||| ||||| || |||||||||
Sbjct 59764 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACTCTGTCCGACTACAA 59705
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| | ||||| || | || || |||
Sbjct 59704 CATCCAGAAGGAGTCCACGCTCCACCTTGTCCTCCGT 59668
>seq8
Length=406722
Score = 96.9 bits (106), Expect = 3e-15
Identities = 132/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || |||||||| || |||||| | || || ||| | |||||| | |
Sbjct 173631 TTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCCGACACCATC 173690
Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371
| |||| | || | || |||| ||||| ||||| || || | || |||||||| |
Sbjct 173691 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCAACAGCGATT 173749
Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431
|| | ||| ||||| ||||| || || | ||||| || ||||||||||||||| ||
Sbjct 173750 GATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAA 173809
Query 38432 GG 38433
||
Sbjct 173810 GG 173811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500166835439360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |