Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq96 253 3e-62 seq205 168 8e-37 seq87 120 4e-22 seq50 89.7 7e-13 >seq96 Length=217617 Score = 253 bits (280), Expect = 3e-62 Identities = 462/674 (69%), Gaps = 8/674 (1%) Strand=Plus/Plus Query 7404 CTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAAT 7463 ||||||||||||| ||||| || || | | ||||| || || | ||||| | Sbjct 70144 CTTTCTTATGTTTCCGTTTGAATTCATTAACAAAGTGGTTAACCAGACGGTTGTCGAAGT 70203 Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAA 7523 | |||||||||| ||| || || || ||||| | ||||| || ||||| ||| | || | Sbjct 70204 CCTCACCACCCAGGTGAGTGTCGCCAGCGGTGGACTTGACCTCGAAGATGCCTTCCTCGA 70263 Query 7524 TGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTAT 7583 | | | | |||||||| || ||||||||||||||||| ||||| || ||||| | Sbjct 70264 TAGTCAGGAGGGAAACATCGAAGGTACCACCACCCAGGTCGAAAATAAGGACGTTGCGCT 70323 Query 7584 CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643 || | || ||||| ||||||||||| ||||| || || || || || || || || | Sbjct 70324 CGCCCTCAACCTTCTTGTCGAGACCGTAGGCGATGGCAGCTGCGGTGGGCTCGTTGATGA 70383 Query 7644 TACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAAT 7703 |||| || ||| ||||||||||| | || || || || || || || || || | Sbjct 70384 TACGGAGGACGTTGAGGCCAGCAATCAGACCGGCGTCCTTGGTGGCCTGGCGCTGGGAGT 70443 Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763 |||| |||||||| || || || ||||| |||| |||| | ||| || || | | Sbjct 70444 CGTTGAAGTAGGCAGGAACGGTGACGACAGCGTTGTTGACGGTGCCACCCAGGTAGGCCT 70503 Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823 | ||| | || ||| ||||| || |||||||| || ||||| || | | || || | Sbjct 70504 CAGCGGTCTCGCGCATCTTGGTCAGGACCATCGAGGAGATCTCCTCGGGGGTGAAGTGCT 70563 Query 7824 TCGTTTCACCGTTAAAATCAACTTCAATCA-TGGGTTTATCCGCAGCACCGGGGATAACC 7882 | || || || || || || || || || | || || | | | | | ||| ||| Sbjct 70564 TGGTCTCGCCCTTGAACTCGACCTCGATGACAGGCTTGCTTCCCTTCTC----GATGACC 70619 Query 7883 TTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATA 7942 || | | | | ||||| ||| | || |||| |||| ||||| | || || Sbjct 70620 TTGAAGGGGAAGTGCTTCATGTCGGCCTGCACCTCAGAGTCCTGGAACTTGCGACCAATC 70679 Query 7943 AGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCG 8002 | ||||| || || || || ||||| | |||||||||||| ||||||||||| || Sbjct 70680 AACCGCTTCGCGTCGAAGACGGTGTTGTGGGGGTTCATGGCGACCTGGTTCTTCGCAGCA 70739 Query 8003 TCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTC 8062 || ||||| ||||| || | || || || || ||| | |||||||| || || || Sbjct 70740 TCGCCGATCAGACGCTC---TGTGTCGGTGAAAGCAACGAATGATGGGGTGGTACGGTTG 70796 Query 8063 CCTTGGTCGTTCGC 8076 || |||||||| || Sbjct 70797 CCCTGGTCGTTTGC 70810 >seq205 Length=65233 Score = 168 bits (186), Expect = 8e-37 Identities = 503/768 (65%), Gaps = 15/768 (2%) Strand=Plus/Plus Query 7021 GATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATT 7080 |||| |||| ||||| | || ||||| ||||| |||||||||||||| || | || | Sbjct 27477 GATGCCGGCCTGGACGGCAGCACCGTAGGCGACGGCCTCATCGGGGTTGATGGACTTCTC 27536 Query 7081 CAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGA 7140 || | || |||| || || || | | | || || || ||||| || || || Sbjct 27537 GAGCTTCTTGCCGTCGAAGTAGTCGCTCAGGAGCTTCTGGATCTTGGGGATACGGGTAGA 27596 Query 7141 TCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGT 7200 |||||||| | ||||| |||| ||| || || ||||| | ||| || Sbjct 27597 ACCACCGACAAGGACGATCTCATCGACTGCGGACTTCTCGATGCCAGCGTCCTTGAGAAC 27656 Query 7201 TTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACA--CAGTTCCTCAAAACGT 7258 | ||| || |||| | | ||| ||| | | ||| ||||| ||||| Sbjct 27657 CTGGGTGACGGGGTCCAGAG--TGCCGGTGAAAGCCTTGGCGTTCAGGTCCTCGAAACGG 27714 Query 7259 GCACGGGTAAT--GGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGG 7316 |||||||| || | |||| |||||| |||||||| | | || || || ||||| | Sbjct 27715 GCACGGGTGATCTGCATGTT--GAAATCCTCGCCGTCGAAGAGAGAGTCGATCTCAATAG 27772 Query 7317 TTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACG 7374 | | || || || | || | || ||||| || ||||| || || || || | ||| Sbjct 27773 TGGCCTGGGCACCGCTG--GACAGGGTACGCTTGGCACGCTCGCAAGCAGTGCGGAGACG 27830 Query 7375 ACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGA 7434 ||||||||||| | || || || | || || || || || || || | Sbjct 27831 TCGAAGGGCACGGGCGTCTCCAGACAGGTCCTTTTTCGTCTTTCGGGAGAATTCCTTCTT 27890 Query 7435 GAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGT 7494 | |||| || || | | ||||| || | |||||||||||| || || || ||||| Sbjct 27891 GCAGTGGTCCAGCAGGTTGGTGTCGAAGTCCTGACCACCCAAGTGGGTGTCACCGGCGGT 27950 Query 7495 CGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACC 7554 || ||||| |||| ||| || | ||||| | || || ||||| || |||||||| Sbjct 27951 GGCCTTGACAGTGAAGACACCACCCTGGATGTTGAGCAGGGACACATCGAAGGTACCACC 28010 Query 7555 ACCCAGGTCAAAAATGAGTACGTT-CGT--ATCGTCGTCTTTGTTCTTATCGAGACCGTA 7611 |||||| || | || || ||||| ||| | || | ||||| |||||||||| Sbjct 28011 ACCCAGATCGTAGATCAGGACGTTGCGTTCCTTGTTGGACTTGTTGGAGCCGAGACCGTA 28070 Query 7612 CGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGT 7671 || || || || || || || || || || ||||| || |||||| || | || | Sbjct 28071 GGCAATGGCAGCGGCGGTAGGCTCGTTGATGATACGGAGGACGTTCAGACCGGAGATGGA 28130 Query 7672 TGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGAC 7731 | ||||| || || || || || || ||||| |||||||| ||||| || | ||| Sbjct 28131 ACCGGCATCCTTGGTGGCCTGACGCTGGTTGTCGTTGAAGTAGGCAGGGACGGTGATGAC 28190 Query 7732 CGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 || | | ||| ||||| ||||| | | || ||||| || ||||| Sbjct 28191 GGCCTTCTCGACCTTCTTGCCGAGCTTGGTCTCGGCGATCTCCTTCAT 28238 >seq87 Length=148739 Score = 120 bits (132), Expect = 4e-22 Identities = 242/356 (68%), Gaps = 5/356 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||| | ||| ||||| || || || || ||| || |||| ||| Sbjct 112028 TCGAAATCCTCACCACCAAGGTGGGTATCACCAGCAGTAGCCAAGACCTCGAAGACACCC 112087 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | | || ||||| || ||||||||||| || || | | || | Sbjct 112088 TGGTCGATCGACAGGAGAGAGACATCGAAAGTACCACCACCAAGATCGTAGACGATGATC 112147 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | || ||| | |||| || ||||||||||| ||||| || ||||| || ||| Sbjct 112148 TGACGCTCAGTGTC---GGTCTTGTCCAGACCGTACGCAATAGCGGCAGCCGTGGGCTCA 112204 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCG 7695 || | || || || ||| |||||||| || | |||| ||||| || || || || || Sbjct 112205 TTGACGATGCGGAGGACGTTGAGGCCAGCGAT-GATGCCGGCATCCTTGGTAGCCTGACG 112263 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || ||||| |||||||| ||||| || || || |||| ||||| ||||| ||||| Sbjct 112264 CTGGTTGTCGTTGAAGTAGGCGGGGACGGTGACAACAGCGTGGGTGACCTTCTTTCCGAG 112323 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 || || || | || ||||| ||| | | ||| | ||||| || |||| Sbjct 112324 GTAGCTCTCGGCAACCTCCTTCATCTTGCCCAAGATCATGGCCGAAATTTCCTCAG 112379 >seq50 Length=202051 Score = 89.7 bits (98), Expect = 7e-13 Identities = 289/445 (65%), Gaps = 13/445 (3%) Strand=Plus/Minus Query 105559 TCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTC 105618 || || || |||||||| | ||| || ||||| | ||| |||||||| ||| | Sbjct 88406 TCTACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGG 88347 Query 105619 GCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCAT 105678 ||||||| | || || ||| || | ||||| || |||| | ||| ||||||||| Sbjct 88346 ACCTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCAT 88287 Query 105679 GGTTCTAAATAGACTGCAATAG-ACC------CTTTACGACGCCCCGCTTGATTGACATA 105731 || || | |||| |||| || ||| ||| | | ||| |||| ||| || Sbjct 88286 GGCTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCC----TGATCGACGTA 88231 Query 105732 TCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGT 105791 || || || ||| | || || ||||| || || || |||| ||| || || || || Sbjct 88230 TCGGGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGT 88171 Query 105792 TCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGC 105851 ||| || | || | ||||| | ||| |||| | ||||| || ||||| Sbjct 88170 GCCAGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGGCCAATGCCTCCAGC 88111 Query 105852 CCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTC 105911 | ||| ||| ||||| || | ||||| || || || || || || || || Sbjct 88110 CATCTTGGAGATCATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTC 88051 Query 105912 CTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTG-GGTGTACCAGCATTGAACA 105970 ||| | ||| ||||| ||||| |||| || | ||| || || || |||||||||| Sbjct 88050 CTTCATGTCAACGAGGAAGCACGACGACAACTG-CGCCTGAGGCGTGCCGGCATTGAACA 87992 Query 105971 GAGTTGGTGTTGCATGAATGAACAA 105995 | ||||| | || || |||| || Sbjct 87991 GCGTTGGCGACGCGTGTGTGAAGAA 87967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635125226041360