Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq50 123 3e-23 >seq50 Length=202051 Score = 123 bits (136), Expect = 3e-23 Identities = 248/361 (69%), Gaps = 14/361 (4%) Strand=Plus/Minus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGAT 109556 ||||| |||||| ||||| |||||||| ||||||||| || ||||| | ||||| | Sbjct 89511 GTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAGCCATCTGCACGATGGT 89452 Query 109557 ACACTTTTGGCTA-ATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGT 109615 | || || | || |||||||| |||||||| | |||||| ||||| || ||| Sbjct 89451 CCTCT----GCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCATCTGGGATG- 89397 Query 109616 CCACGA-TGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGAC 109674 | ||| | || || ||||||||| | | | ||| | | ||||| || | ||| Sbjct 89396 CTGCGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCTTCAGGTCCTCAGAC 89337 Query 109675 CAGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTG--TTGACCACGACAAATTCAC 109732 || ||||| || ||||| | | || | || ||||| || || || | Sbjct 89336 CACAGACCACACTGCACCAGATCCTTGAGCAGC--CATGGATTGACAACTTGGAACTCGC 89279 Query 109733 CAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGC 109792 |||| || ||| || | |||||||| | || ||||| || || ||||| ||||||| Sbjct 89278 CAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAGCACTCGTTGTTGC 89219 Query 109793 CTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGAC 109852 | ||||| || | ||| || || ||||||||||| ||||| | | ||||| |||| || Sbjct 89218 CCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCTGTTGCGGACAC 89159 Query 109853 C 109853 | Sbjct 89158 C 89158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588968976461200