Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq50 257 2e-63
>seq50
Length=202051
Score = 257 bits (284), Expect = 2e-63
Identities = 1140/1773 (64%), Gaps = 48/1773 (3%)
Strand=Plus/Minus
Query 105558 TGAACTGAATTGGGCGC-GCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGT 105616
|||||||||| || ||| ||| ||||| | ||||| |||||||| || ||||||||
Sbjct 89635 TGAACTGAATCGG-CGCTGCCGCTGCCTGTGTGCGGAGGTAGTACATGCCAGTCTTGAGA 89577
Query 105617 CCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CAT 105675
|| | ||||| || | ||||| || || |||| ||| | || || | |||
Sbjct 89576 CCCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAAGG-CTCACGCAT 89518
Query 105676 GAAAAGATTCAT--ACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATATCA 105733
| | |||| ||| |||| |||| |||||| |||||| | || ||||| |
Sbjct 89517 GTGTATGTTCAGCGACTGGGACT--GGTCGATGAAGGCACCACGATCGGCAGCCATCTGC 89460
Query 105734 ATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGG 105793
| || | || | ||| ||||| || || |||||| |||||| |||||||||
Sbjct 89459 ACGATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCATCTGGG 89400
Query 105794 ATATCTGAGA-TATTTTGAATTGAACCCCCCGCCTTGACCATGAGATCCTTCATATCCTT 105852
|| ||| || |||| || || || || || | || ||| | | ||||| ||||
Sbjct 89399 ATG-CTGCGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCTTCAGGTCCTC 89341
Query 105853 GGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTG--TTGACAATCACAAAC 105910
||||| |||||| || | ||||| |||| || | || ||||||| |||
Sbjct 89340 AGACCACAGACCACACTGCACCAGATCCTTGAGCAGC--CATGGATTGACAACTTGGAAC 89283
Query 105911 TCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTA 105970
|| || ||||| | | | |||||||||| | || ||||| |||||||| || ||
Sbjct 89282 TCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAGCACTCGTTG 89223
Query 105971 TTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGA 106030
|| |||| ||| || | || ||||| || ||||| || |||||||| | ||||| ||
Sbjct 89222 TTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCTGTTGCGG 89163
Query 106031 AGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTT--GGTTT 106088
| ||| | | |||||| |||| | | |||||||| || || | || ||
Sbjct 89162 ACACCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCCAGA-GATCAGAGGGCTT 89104
Query 106089 CACCTTC--CCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGT 106146
|| || |||||| || | || || | || ||||| |||||| ||||| |||
Sbjct 89103 GACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGGAGATCCCTCGTATGA 89044
Query 106147 CTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACAT 106206
|||| || | | | || | ||||| || |||| ||||| || ||
Sbjct 89043 TGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGGGCGGCGTGGTAGAT 88984
Query 106207 GGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAG 106261
||| || ||||| | |||| ||| || ||| ||| || || |||| ||
Sbjct 88983 GGTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACTCGAAAGGCATGCGGAG 88924
Query 106262 CGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGC 106321
| || ||| |||| || ||||| || || |||| |||||||| | ||| |||
Sbjct 88923 GGCCAAGAAAG-----CATCGGCCAGACCCTGGACGCCCACGCCAATAGGACGGTGGCGC 88869
Query 106322 ATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGA 106381
|| || ||| || || | ||| ||||| || | || |||| ||| ||
Sbjct 88868 ATGTTGCTCTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCGATGATCTTGTTCAGG 88809
Query 106382 TTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCG-AGTCTC 106440
|| || | || |||| ||| || || | | | | | | || | ||||
Sbjct 88808 TTGCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGTTATA-GCGCTCATTCTC 88750
Query 106441 TTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTT 106500
| | ||| ||| ||| |||||||| || |||| ||||| ||||| ||||||
Sbjct 88749 GTAGTCGACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACAGCAACCTCATCAGG 88690
Query 106501 ATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTT 106560
| | | ||||| | || || || || | |||||| || ||| || || | |||||
Sbjct 88689 AGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGTGCCAAGGTTCTT 88630
Query 106561 TTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGT 106620
||||| ||||| |||| ||||||||| | |||| |||| | || ||||| ||
Sbjct 88629 CTGGTTGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAGGGGTTGCCTGTCTCGGT 88570
Query 106621 CTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTT-GGCC-CG 106677
|| | || ||| || || | ||| | | || ||| || || | | || |||| ||
Sbjct 88569 TTGAGCCTCGAGGATGGCATACCAGAGCTTCTGCGCCTT---CAGGGTCTTTTGGCCGCG 88513
Query 106678 TCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAG 106737
||||| ||||||||| ||| || || || |||||||| || ||||| ||
Sbjct 88512 ACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAG 88453
Query 106738 ACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCAT 106797
|| || || || || || | |||| ||| | || || ||| || ||||||||
Sbjct 88452 GCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCTACACGCTTCAT 88393
Query 106798 GAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCAC 106856
||| || || || ||||| |||| ||||| || | | ||| || ||||||| | |
Sbjct 88392 GAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGA-CCTCTTCCTTTC 88334
Query 106857 CTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGA 106916
| ||||| || | || |||||||| | || ||| |||||||||||||| || ||||
Sbjct 88333 CGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGA 88274
Query 106917 CTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAA 106973
|| | || || || | ||| | |||| || || || || ||| ||| |
Sbjct 88273 TGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGA 88214
Query 106974 ATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGA 107031
| || || | ||| || || || |||| || || || || || ||| || |||
Sbjct 88213 AGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAG- 88155
Query 107032 TTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTG 107091
|||| | | |||| || | ||||| || |||||| ||| |||||
Sbjct 88154 -CCGGTGGCACGGATGCGGTGGACGTTGAGGCCAATGCCTCCAGCCATCTTGGAGATCAT 88096
Query 107092 CGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAG 107151
||||| | | || || ||||||| || | || ||||||||| || | | ||
Sbjct 88095 GGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAG 88036
Query 107152 GAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTG 107211
|||||| |||| ||||| || || || |||||||| || ||||| | |||||
Sbjct 88035 GAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTG 87976
Query 107212 AATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCC 107270
|||| | || | | |||||| | || ||| ||||| | || || |||| ||||
Sbjct 87975 TGTGAAGA-ACTTGTTGGACATGTAGTTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCC 87917
Query 107271 CGTGGATGCCGATGGCCACACGCATAAACATGT 107303
| |||||| | || |||||||| | |||||
Sbjct 87916 CCCAGATGCCAACAGCGACACGCATCAGCATGT 87884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589973764478960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |