Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq104 91.5 1e-13 >seq104 Length=128129 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||||||||| ||||| || || | || | || ||| Sbjct 59447 ACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGACAGCGTCCGGCCGTCTTCC 59506 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || || ||||||||| | || | ||||||||||| | Sbjct 59507 AGCTGCTTGCCCGCGAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGA 59566 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | |||| || | || || |||| ||| || || || Sbjct 59567 ATCTTGGCCTTCACGTTGTCGATCGTATCCGATGATTCCACCTCGAGGGTGATCGTCTTG 59626 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || ||||| || ||||| |||||| Sbjct 59627 CCCGTCAGGGTCTTGACGAAGATTTGCATA 59656 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || || | || | || || ||||| |||||||| || Sbjct 59693 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAG 59752 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | ||||||||||| ||||| || ||| Sbjct 59753 ATGAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACGTTG 59812 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || |||| ||| ||||| || || ||||||||||| || Sbjct 59813 TCGATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACG 59872 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 59873 AAGATCTGCATA 59884 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || ||| | || |||| || ||||| || || || || Sbjct 59921 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAA 59980 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| ||||| || Sbjct 59981 ATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--AT 60038 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| ||| || ||| || || | || ||||| || || ||||| ||||| Sbjct 60039 --TGTCGATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTT 60096 Query 34967 CACAAAGATCTGCATATT 34984 || ||||||||||| || Sbjct 60097 GACGAAGATCTGCATCTT 60114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324629825525712