Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq104 91.5 1e-13
>seq104
Length=128129
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || || ||||||||||| ||||| || || | || | || |||
Sbjct 59447 ACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGACAGCGTCCGGCCGTCTTCC 59506
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || || || || || || ||||||||| | || | ||||||||||| |
Sbjct 59507 AGCTGCTTGCCCGCGAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGA 59566
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| || ||| | |||| || | || || |||| ||| || || ||
Sbjct 59567 ATCTTGGCCTTCACGTTGTCGATCGTATCCGATGATTCCACCTCGAGGGTGATCGTCTTG 59626
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||||| || ||||| || ||||| ||||||
Sbjct 59627 CCCGTCAGGGTCTTGACGAAGATTTGCATA 59656
Score = 89.7 bits (98), Expect = 3e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| || || | || | || || ||||| |||||||| ||
Sbjct 59693 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAG 59752
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||| || | || | ||||||||||| ||||| || |||
Sbjct 59753 ATGAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACGTTG 59812
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || | ||| || |||| ||| ||||| || || ||||||||||| ||
Sbjct 59813 TCGATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACG 59872
Query 34971 AAGATCTGCATA 34982
||||||||||||
Sbjct 59873 AAGATCTGCATA 59884
Score = 89.7 bits (98), Expect = 3e-13
Identities = 140/198 (71%), Gaps = 8/198 (4%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| || ||| | || |||| || ||||| || || || ||
Sbjct 59921 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAA 59980
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| | || | ||||||||||| ||||| ||||| ||
Sbjct 59981 ATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--AT 60038
Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
| ||||| ||| || ||| || || | || ||||| || || ||||| |||||
Sbjct 60039 --TGTCGATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTT 60096
Query 34967 CACAAAGATCTGCATATT 34984
|| ||||||||||| ||
Sbjct 60097 GACGAAGATCTGCATCTT 60114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324629825525712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |