Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq50 408 8e-109 seq86 134 3e-26 >seq50 Length=202051 Score = 408 bits (452), Expect = 8e-109 Identities = 1146/1739 (66%), Gaps = 60/1739 (3%) Strand=Plus/Minus Query 212691 TGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATG 212750 |||| |||||| ||||| |||||| ||||| | | | || || ||||| | | | Sbjct 89516 TGTATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAGCCATCTGCACG 89457 Query 212751 ATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAG 212810 || ||||| |||| |||||| ||||||||| ||| | |||| ||| ||||||| | Sbjct 89456 ATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCATCTGGGATG 89397 Query 212811 CCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGC--TGCAGGCG------CATGT 212862 | | | || ||||| | ||| || || ||||| || | ||| || || Sbjct 89396 CTGCGAATATTCTGGATAGAGCC-------ATCCTCAGCGATG-ATGCGGTTCTTCAGGT 89345 Query 212863 CCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGA 212922 |||| ||| || || | | |||| ||||| ||| || ||||| | |||| Sbjct 89344 CCTCAGACCACAGACCACACTGCACCAGATCCTTGAGCAGCCATGGATTGACAACTTGGA 89285 Query 212923 AGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGT 212982 | || || | |||||| | | ||| || | ||| || || |||||||| | || ||||| Sbjct 89284 ACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAGCACTCGT 89225 Query 212983 TGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCC 213042 |||| ||||| ||||| | ||| ||| ||||||||||| |||| || | ||||| | Sbjct 89224 TGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCTGTTGC 89165 Query 213043 TCACTCCGTGCTCGCCGATGA-GGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGG 213101 || ||||||| ||| ||| ||| | |||||||||| |||| | Sbjct 89164 GGACACCGTGCTGCTTGATCTTGGCCTTCAAGGCGT-CCCAGTCCCAGAGATCAGAGGG- 89107 Query 213102 TCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCC 213161 || | | || |||||||||||| |||||| ||| || | | ||||| ||| Sbjct 89106 --CTTGACATT---GTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGGAGATCCC 89052 Query 213162 TGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCG 213221 | ||| || ||||||||||||| ||||||| | || || || || ||||| ||| Sbjct 89051 TCGTATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGGGCGGCG 88992 Query 213222 TAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGC 213281 | ||||||||| || || |||| | |||| |||| ||||| || ||| ||| ||| Sbjct 88991 TGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACTCGAAAGGC 88932 Query 213282 ATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGT 213341 || | | ||| |||| ||||| |||||||| || | ||| || || | ||| Sbjct 88931 ATGCGGAGGGCCAAGAAAGCATCGGCCAGACCCTGGACGCCCACGCCAATAGGACGGTGG 88872 Query 213342 CTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTG 213401 | || ||| |||| | |||| | || || |||| |||||||||||||| Sbjct 88871 CGCATGTTGCTCTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCGATGATCTTGTTC 88812 Query 213402 AGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG---TGATTGAACACGTAG 213458 |||||||| | | || | |||||| | | ||| ||| | | || | | | | Sbjct 88811 AGGTTGCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGTTATAGCGCTCATT- 88753 Query 213459 CCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCC 213518 | ||| | || |||| ||||||||||| ||||||||||| || || ||||| Sbjct 88752 --CTCGTAGTCGACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACAGCAACCTCA 88695 Query 213519 TGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGG 213578 | || | | ||||| |||||||| ||||| |||||| || || |||||||| ||| Sbjct 88694 TCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGTGCCAAGG 88635 Query 213579 TTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTC 213638 |||| ||||| ||| |||||| ||||||||| | |||| ||||| || ||| Sbjct 88634 TTCTTCTGGTTGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAGGGGTTGCCTGTC 88575 Query 213639 TCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGTACCTGGCCTTGACCACCCGCCTGA 213696 || || | | | || || ||| |||||| | | ||||| | | || Sbjct 88574 TCGGTTTGAGCCTCGAGGAT--GGCATACCAGAGCTTCTGCGCCTTCAGG----GTCTTT 88521 Query 213697 CAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACC 213755 || || | | || |||||||| ||||| || | | ||| || | ||| || Sbjct 88520 TGGCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAG 88461 Query 213756 CTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGT-CATCTCTGAC 213814 | | || || || || ||| ||||| || ||||||| |||| | ||||| || Sbjct 88460 TCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCT-AC 88402 Query 213815 TCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTC 213874 | || |||||| || ||||||| ||| || || ||| ||||| | | | ||| Sbjct 88401 ACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTC 88342 Query 213875 GTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTC 213934 ||| ||| ||| || ||||| || || || || |||| || |||||||| ||||| Sbjct 88341 TTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTC 88282 Query 213935 CATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCAC 213991 || |||||||||||| || || | || | ||||| ||||| || || | ||| Sbjct 88281 CAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGT 88222 Query 213992 CATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTAT 214051 ||||||||| |||| | || | | || |||||| |||||||| || || || Sbjct 88221 GTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGAT 88162 Query 214052 ATACGAGCCGGAGGCCCTCAGGTTGCTCATGGA----GAGCCCTATGCCACCGGCGTACT 214107 || ||||||| ||| | || ||| |||| ||| || ||||| || || || Sbjct 88161 GTAGGAGCCGGTGGCAC---GGATGC-GGTGGACGTTGAGGCCAATGCCTCCAGCCATCT 88106 Query 214108 TGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGA 214167 ||||||||||||| ||| | ||| || || |||||| | |||||||| || | | Sbjct 88105 TGGAGATCATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCA 88046 Query 214168 GGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG-GACGAGCCAGAGTTGAAAAGCGTG 214226 || | | |||||| ||| | || | ||||| | || ||| | ||||| ||||| Sbjct 88045 TGTCAACGAGGAAGCACGACGACAACT-GCGCCTGAGGCGTGCCGGCATTGAACAGCGTT 87987 Query 214227 GGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGG 214286 || || || | | |||||||| || | | |||||||||| || || | Sbjct 87986 GGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAAGAACCCTCTCG 87927 Query 214287 ATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTCTCTATG 214346 |||| || | ||| | |||| | ||||||||||||||| |||| ||| | | Sbjct 87926 ATGTTGTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCTCGACG 87867 Query 214347 GGT---CCTTTGGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 | || ||| | ||||| || || || ||||| || |||||||| |||||||| Sbjct 87866 ACTTTACCGTTGAG---TTTGAGGAGATACGAACGCTCGAGGGTCTTGAAGCCAAAGTA 87811 >seq86 Length=153077 Score = 134 bits (148), Expect = 3e-26 Identities = 349/519 (67%), Gaps = 15/519 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| |||||||| | | ||||||||||| Sbjct 136667 CTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTCCCGCCAAGGGAGATGTTCTC 136608 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||| ||||| | | || || | | | || ||| | | || | Sbjct 136607 CATGAAGTCGAAAGGGTTAGTAGACTTGTAGATCT-TCTCGTTGCCGAGAGCGACGAGGA 136549 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | || |||||| | |||||||| | ||| | | || |||||||| | |||| Sbjct 136548 GACGGTCGGCGACGAATTCGATGTACTGCTTCATCAAGTTGGCATTCATGCCGAGCAGGG 136489 Query 48018 -ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 |||||| ||| |||| || || ||||||||||| || || || || | || Sbjct 136488 CACACGG-CAAGGCCTCGGTCAGGAACTCCTTCTCAATGGCAACAGCATCGGTAATGATG 136430 Query 48077 TGCTTA-ACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132 |||| ||||| || ||| || | ||||| |||||| || | | |||| ||| Sbjct 136429 -GCTTCCACGCGCTGCTTGCTGGGGCGGTTGTT---CAGGTG--TGAGA-ACAGCAAGCA 136377 Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192 ||| ||||| |||||| || ||||| || |||||| ||||||||||| || || Sbjct 136376 GGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGTTCGTTGGAGAAGGTCAGGCC 136317 Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252 |||||| | || | || || |||||||| || | ||||||| |||| |||||| || Sbjct 136316 AGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAAGCGCCACTGAAGAAAAT 136257 Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312 || || || || || || || || | || || | | || | ||| ||| Sbjct 136256 ACCTTCGACAGCAGCAAATGCAACAAGGCGCTGAGCGTAGGTAGACTCACGGTCCTGGAT 136197 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 ||| || |||||||| |||||||| |||||| || Sbjct 136196 CCACCTCAGAGCCCAGTCGGCCTTCTTGCGGATGCAAGG 136158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931521691471360