Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq50 233 4e-56 seq86 104 4e-17 >seq50 Length=202051 Score = 233 bits (258), Expect = 4e-56 Identities = 809/1232 (66%), Gaps = 54/1232 (4%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 || ||||| ||||||||||||||||| |||||| |||||| || ||| | ||||| || Sbjct 89003 GTGAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAG-CTCACGAGCCTCAGG 88945 Query 221476 AGAAGTGAAGGGCATACGCAGCATCT-GAAAGACGTCGGCCAGTCCCTGTACTCCGATAC 221534 || ||| ||||| || || | ||||| | |||||||| ||||| || || | | Sbjct 88944 TGACTCGAAAGGCATGCGGAGGGCCAAGAAAG-CATCGGCCAGACCCTGGACGCCCACGC 88886 Query 221535 CGATGGGCCTGTGTCTCCTGTTGGAA--GCGGCCGCTTCTGGCACGGGATAAAAGTTGAC 221592 | || || | ||| | | ||||| |||| || || || || ||||| ||||| Sbjct 88885 CAATAGGACGGTGGCGCATGTTGCTCTTGCGG--GCCTCCGGAACAGGATAGTGGTTGAT 88828 Query 221593 GTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTG 221652 ||||| | ||||| ||||| || || ||| | || ||| |||| |||| Sbjct 88827 ATCGATGATCTTGTTCAGGTTGCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAA 88768 Query 221653 ATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCT 221712 || | | | ||| ||| || || | || || ||||| | Sbjct 88767 GTT--ATAGCG-CTCATTCTCGTAGTCGACGA-----ACTGTGGC----AGGGCGATAGA 88720 Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772 |||||||| || || || ||||| || | ||||| |||||||| || || || Sbjct 88719 CGCCAGGTTGCAGACAGCAACCTCATCAGGAGCAGAATACTCGATGATCTCAGTGCAAAG 88660 Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTT 221832 |||| || ||||| || |||| || || || |||||| ||||| ||||| Sbjct 88659 GTTGGAGCTGCGAATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGTGATCCTT 88600 Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTC 221892 ||| | ||| ||||| ||| ||||| |||||| | || || | |||||| | Sbjct 88599 GTACAACATGAAGGGGTTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGCT- 88541 Query 221893 TCTG-GCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATACCCGGTATAGAGC 221950 |||| || ||| ||| | ||| | || ||||||| || | | | || || ||||| Sbjct 88540 TCTGCGCCTTCAGGGTCTT-TTGGCCGCGACCCTCGCGCTCGTACTTCTCG-TACAGAGC 88483 Query 221951 ATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGA 222010 | | |||| || ||||| ||| | ||||| || ||| | ||| ||||||||| Sbjct 88482 CT--CGAACTCCTCGCCGTAGCAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGA 88425 Query 222011 CTCCAGT-GC--TTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCC 222067 |||||| || || || ||| || | || ||||||||| ||||||||||| || || Sbjct 88424 GTCCAGTCGCCGTTCTTCTCT---ACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCA 88368 Query 222068 TGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAAC 222127 | ||||| || | | || ||| ||| |||| ||| |||| ||| || | ||| Sbjct 88367 AGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAAC 88308 Query 222128 TCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTG 222187 || || | ||||||||||| |||||||| |||| ||| | ||| ||||| ||||| ||| Sbjct 88307 TCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTG 88248 Query 222188 CCACCCTGATCCAC-CATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTC 222245 ||||||||||| || ||| ||| | |||||||| || | | || | | | Sbjct 88247 CCACCCTGATCGACGTATC--GGGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGC 88190 Query 222246 CGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG 222305 | ||||| ||||||||||| ||||| | ||| ||| | || | | || | Sbjct 88189 CATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAGCCGGTGGCAC---GGATGC-GGTGG 88134 Query 222306 AC----ATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCC 222361 || | ||| || || || || || ||||||||||| ||| |||| || || || Sbjct 88133 ACGTTGAGGCCAATGCCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTCAGGGTATCA 88074 Query 222362 ATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGAT 222421 ||||||||| || ||||||||| | || | || || || ||||||| ||| | Sbjct 88073 TAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGGAAGCACGACGACAACTGCGCC 88014 Query 222422 TTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATC 222481 | | | | ||| || |||||||| || |||||||| ||| | | ||||| Sbjct 88013 TGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGTGTGAAGAACTTGTTGGACATG 87954 Query 222482 AGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTC 222541 | ||| ||||| | || || ||||||||||||| || | ||| | | Sbjct 87953 TAGTTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCCCCCAGATGCCAACAGCGACACGC 87894 Query 222542 ATGTACATGTACTGGGGCCTCTCCACAGGAC----CCTTGGAGCTGGAGAGCAGGTACGA 222597 || ||||| ||| |||| ||| || ||| || | ||| | ||| || ||||| Sbjct 87893 ATCAGCATGTGCTGTGGCCGCTCGAC--GACTTTACCGTTGAGTT--TGAGGAGATACGA 87838 Query 222598 TTTTTCCAGAGTCTTGAACCCAAAGTAGTTGA 222629 || || |||||||| |||||||| |||| Sbjct 87837 ACGCTCGAGGGTCTTGAAGCCAAAGTA-TTGA 87807 Score = 91.5 bits (100), Expect = 3e-13 Identities = 133/186 (72%), Gaps = 8/186 (4%) Strand=Plus/Minus Query 221069 TCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGA----CCATGTGCTTGTTCACCAC 221124 || || | ||| ||||| | || |||| |||||| ||||| | ||| || || Sbjct 89345 TCCTCAGACCACAGACCACACTGCACCAGATCCTTGAGCAGCCATG-GATTG---ACAAC 89290 Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184 |||||| || || | |||||| | | ||| || | ||| || || | || || | || Sbjct 89289 TTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAGCA 89230 Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244 ||||||||||||||||||||| | || ||| ||||||||||| |||| || || || Sbjct 89229 CTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCT 89170 Query 221245 GTTGCG 221250 |||||| Sbjct 89169 GTTGCG 89164 >seq86 Length=153077 Score = 104 bits (114), Expect = 4e-17 Identities = 287/446 (64%), Gaps = 5/446 (1%) Strand=Plus/Plus Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 |||| || || || ||||||||||| || || || || ||||| || | || || ||| Sbjct 136225 AGCGCCTTGTTGCATTTGCTGCTGTCGAAGGTATTTTCTTCAGTGGCGCTTTCGCTTCCA 136284 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCA 25996 |||||||||| ||| || || ||||| || ||| ||| |||||||| |||||| Sbjct 136285 TCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGCCTGACCTTCTCCAACGAACTCATCT 136344 Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCC 26056 | ||||||||||| |||| || || |||||| |||| | | | ||| || | Sbjct 136345 CTCGTGACGAGGGTCTGCACACTGACTTCGCCTGCTTGCTGTTCTC---ACACCTGAACA 136401 Query 26057 ACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAG 26115 || || |||| || ||| | ||||| | || ||||| | || |||||| Sbjct 136402 AC-CGCCCCAGCAAGCAGCGCGTGGAAGCCATCATTACCGATGCTGTTGCCATTGAGAAG 136460 Query 26116 GAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGC 26175 ||||| | | |||||||| || | |||| Sbjct 136461 GAGTTCCTGACCGAGGCCTTGCCGTGTGCCCTGCTCGGCATGAATGCCAACTTGATGAAG 136520 Query 26176 CAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTAC 26235 || ||||| || | || ||||||| ||| || | || || || | ||||| Sbjct 136521 CAGTACATCGAATTCGTCGCCGACCGTCTCCTCGTCGCTCTCGGCAACGAGAAGATCTAC 136580 Query 26236 AGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTC 26295 | | ||||||| |||||||| ||||| ||||| || | | ||||||||||||||| Sbjct 136581 AAGTCTACTAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGGAAGACCAACTTC 136640 Query 26296 TTTGAAAAGAGGGTCGGCGACTATCA 26321 || || ||| | || || ||||| || Sbjct 136641 TTCGAGAAGCGTGTTGGTGACTACCA 136666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928833723525760