Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq50 232 8e-56 >seq50 Length=202051 Score = 232 bits (256), Expect = 8e-56 Identities = 1136/1777 (64%), Gaps = 42/1777 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| ||||| | ||||| ||||| | |||||| ||||| |||| || || Sbjct 87877 CCACAGCACATGCTGATGCGTGTCGCTGTTGGCATCTGGGGGGACAACATCGAGAGGGTT 87936 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || | |||||| | | || | |||| ||||| | ||||| || || Sbjct 87937 CTTGAGACCTACAACTACATGTCCAACAAGT-TCTTCACACACGCGTCGCCAACGCTGTT 87995 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 |||||| || || || ||||| |||| |||||||| | | || |||||||| Sbjct 87996 CAATGCCGGCACGCCTCAGGCGCAGTTGTCGTCGTGCTTCCTCGTTGACATGAAGGAGGA 88055 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | || | || ||||||| || || | | ||||| ||||| ||| |||||| Sbjct 88056 CAGCATTGAGGGCATCTATGATACCCTGAAGACCTGTGCCATGATCTCCAAGATGGCTGG 88115 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACA 75508 || ||||| | || |||| | | |||| ||| || ||| || || Sbjct 88116 AGGCATTGGCCTCAACGTCCACCGCATCCGTGCCACCGG--CTCCTACATCGCTGGCACC 88173 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || || || |||| || || || ||| | || || || ||| ||| || || || Sbjct 88174 AACGGCACGTCCAATGGCATCATCCCTATGTTGCGTGTCTTCAACAACACTGCCCGATAC 88233 Query 75569 GTAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCAT 75625 || |||| | || | ||| || | | || ||||| |||| |||||||| Sbjct 88234 GTCGATCAGGGTGGCAATAAGCGCCCCGGTGCTTTTGCCATCTACCTGGAGCCATGGCAC 88293 Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG- 75684 || ||| || | |||||||| || | || ||||| || | ||||||| || ||| Sbjct 88294 GCTGATGTCTTCGAGTTCCTCGACCTGCGGAAGAACCACGGAAAGGAAGAGG-TCCGTGC 88352 Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 | | || ||||| |||| ||||| || || || ||||||||||| || ||| || Sbjct 88353 TCGTGACCTCTTCCTTGCCCTCTGGATCCCGGATCTCTTCATGAAGCGTGTAGAGAAGAA 88412 Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804 || | ||| |||| | || || || || || || || ||||| || || Sbjct 88413 CGGCGACTGGACTCTGATGTGCCCCAACGAGTGCCCCGGCCTTGCCGACTGCTACGGCGA 88472 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACC 75864 |||||| || || || ||| ||||| || |||||| | | | | ||| | Sbjct 88473 GGAGTTCGAGGCTCTGTACGAGAAGTACGAGCGCGAGGGTCGCGGCCAAAAGACCCTGA- 88531 Query 75865 AGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATA 75923 || ||| || | | ||| | || || ||| | | || || ||||| || | || | | Sbjct 88532 AGGCGCAGAAGCTCTGGTATGCCATCCTCGAGGCTCAAACCGAGACAGGCAACCCCTTCA 88591 Query 75924 TGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGA 75983 || | ||||||||| ||| ||||| ||||| ||||| | || || || | Sbjct 88592 TGTTGTACAAGGATCACGCCAACCGCAAGAGCAACCAGAAGAACCTTGGCACCATTCGCA 88651 Query 75984 GCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCA 76043 |||| || |||||||| || || | ||||| | | | |||||| ||||| |||| Sbjct 88652 GCTCCAACCTTTGCACTGAGATCATCGAGTATTCTGCTCCTGATGAGGTTGCTGTCTGCA 88711 Query 76044 ATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTC-GCACTTTTGATTAT 76102 | |||| || |||||||| ||| ||| ||| | | |||| | || || | || Sbjct 88712 ACCTGGCGTCTATCGCCCTGCCACAGTTCGTCGACTACGAGAATGAGCGCTATAACTTCC 88771 Query 76103 GAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGA 76162 | || || ||| |||| || | || || || ||| |||| || | Sbjct 88772 -AGTTGCTGCACGAAGTCACCCAGGTCGTCGTTCGCAACCTGAACAAGATCATCGATATC 88830 Query 76163 AATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTG 76222 || ||||| ||| | || || ||| || ||||| ||| | |||||||| || Sbjct 88831 AACCACTATCCTGTTCCGGAGGCCCGCAAGAGCAACATGCGCCACCGTCCTATTGGCGTG 88890 Query 76223 GGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCAT-----TTGATTCAG 76277 || || || ||||| || |||| || ||| ||| || ||||| | || ||| Sbjct 88891 GGCGTCCAGGGTCTGGCCGATGCTTTC---TTG-GCC-CTCCGCATGCCTTTCGAGTCAC 88945 Query 76278 ATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGG 76337 ||| || ||| |||| | ||||| || ||||| || ||||| |||| | Sbjct 88946 CTGAGGCTCGTGAGCTGAACAAGCAGATCTTCGAGACCATCTACCACGCCGCCCTCACCG 89005 Query 76338 CGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGT 76397 | ||||| | || | | | || |||| ||| ||||| ||||||| | Sbjct 89006 CATCGTGTGACATTGCCAAGGTTGATGGCCCCTACTCATCATACGAGGGATCTCCCGTCT 89065 Query 76398 CCCAAGGGGTGCTTCAGTTTGATATGTGGGA--AGGTGAAACCAAGCTCAACTACG--AC 76453 |||| || | || |||| || |||||| | | || || || || | || | || Sbjct 89066 CCCAGGGTATCCTGCAGTACGACATGTGGAACAATGTCAAGCCCT-CTGATCTCTGGGAC 89124 Query 76454 TGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCA 76513 ||||| | | |||| |||||| || | ||| | || ||||| | |||||||| Sbjct 89125 TGGGACGCCTTGAAGGCCAAGATCAAGCAGCACGGTGTCCGCAACAGCTTGTTGATGGCG 89184 Query 76514 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATAC 76573 || ||||| || ||||| || | || ||| |||| || || || |||||||| || || Sbjct 89185 CCCATGCCCACTGCCTCGACTTCGCAGATCCTGGGCAACAACGAGTGCTTTGAGCCCTAT 89244 Query 76574 ACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAA--CAAGC 76631 ||| | |||||||| | | | | ||||| || ||||| ||||||| || | Sbjct 89245 ACATCCAACATCTATCAGCGCCGCGTGCTCGCTGGCGAGTTCCAAGTTGTCAATCCATGG 89304 Query 76632 ACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGG 76691 || |||| || || | || |||||| ||||| |||| ||||| | | ||| Sbjct 89305 --CTGCTCAAGGATCTGGTGCAGTGTGGTCTGTGGTCTGAGGACCTGAAGAACCGCATCA 89362 Query 76692 TGAAAGCGGGTGGTTCCATTCAAAATAT-CTCAGATATCCCAGATGATATCAAGAATCTC 76750 | | || ||| || || || ||||| | ||| ||||||||||| |||||| ||| Sbjct 89363 TCGCTGAGGATGGCTCTATCCAGAATATTCGCAGC-ATCCCAGATGACATCAAGGCCCTC 89421 Query 76751 TACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGT 76810 ||| || || ||||| ||| | || || | | ||||| || ||||||||| Sbjct 89422 TACAAGACCGTCTGGGAGATCTCGCAGAGGACCATCGTGCAGATGGCTGCCGATCGTGGT 89481 Query 76811 CGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATG-GAAAGTCCAACGATGTCC 76867 |||||| || | |||| ||| |||| || |||| | || || | ||| | Sbjct 89482 GCCTTCATCGACC--AGTCCCAGTCGCTGAACATACACATGCGTGAG-CCTTCTATGGGC 89538 Query 76868 AAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTAT 76927 ||| || || ||||| | || ||||| | ||| ||||| || || |||||||| Sbjct 89539 AAGATCACTAGCATGCACTTCACCGGTTGGAAGCTGGGTCTCAAGACTGGCATGTACTAC 89598 Query 76928 CTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 ||||| || |||| || || |||||||||| Sbjct 89599 CTCCGCACACAGGCAGCGGCAGCGCCGATTCAGTTCA 89635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596562485907520