Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq86 105 2e-17
seq50 102 2e-16
seq27 93.3 1e-13
>seq86
Length=153077
Score = 105 bits (116), Expect = 2e-17
Identities = 160/226 (71%), Gaps = 10/226 (4%)
Strand=Plus/Plus
Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGA 133496
||||||| || ||||| | ||||||||| | | |||||||||||| ||| ||
Sbjct 136156 TTCCTTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCCAGGAC---CGT--GA 136210
Query 133497 GTTTTGCTAC-----TCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGG 133551
|| | |||| || || ||||| ||||||| || || || ||||| ||||||||
Sbjct 136211 GTCTACCTACGCTCAGCGCCTTGTTGCATTTGCTGCTGTCGAAGGTATTTTCTTCAGTGG 136270
Query 133552 TGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTC 133611
|| ||| || || || ||||| || ||||||||| | | ||||| ||| || ||
Sbjct 136271 CGCTTTCGCTTCCATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGCCTGACCTTCTC 136330
Query 133612 TAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657
|||||||| || || | ||||||| || ||||| || || |||
Sbjct 136331 CAACGAACTCATCTCTCGTGACGAGGGTCTGCACACTGACTTCGCC 136376
>seq50
Length=202051
Score = 102 bits (112), Expect = 2e-16
Identities = 127/172 (74%), Gaps = 4/172 (2%)
Strand=Plus/Minus
Query 155979 CCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATAC 156038
||||| |||||||| || || | ||| || | ||||| || ||||||||| ||
Sbjct 88334 CCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAG 88275
Query 156039 ATAGCAAAACTACCATTCCTCTT---GCCACCCTGATCTACATACCGAGCAGTCTTATTG 156095
|| |||||| ||| | ||| |||||||||||| || || || ||||| || |||
Sbjct 88274 ATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTG 88215
Query 156096 AAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC-GCGA 156146
||||||| | |||||| || || |||||||| ||||| ||||| || ||||
Sbjct 88214 AAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGA 88163
>seq27
Length=255484
Score = 93.3 bits (102), Expect = 1e-13
Identities = 125/174 (72%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543
|||||| |||| ||||||||||||||| |||||||| |||||||| | |||||||| |
Sbjct 17173 TGCACCATGTGCAATCATACAATCACGTTCCATTTCTCCGAAACGCAAGCCACCATCTCT 17232
Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603
||| | ||||||| | || ||||| || | | || || || || ||| |||
Sbjct 17233 AGCACGACCCTCGACGGGTTGACGCGTCATGATCTGCACTGGGCCACGGGCGCGCGCATG 17292
Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657
||| |||| ||||| || ||||||||| ||| | | || |||| |||
Sbjct 17293 GATCTTGTCATCCACCATGTGACGGAGACGCTGATAGTACGTCGGGCCGAAGAA 17346
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471799609789498
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |