Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq50 150 3e-30 seq2 132 8e-25 seq14 116 6e-20 seq86 111 2e-18 seq124 105 1e-16 >seq50 Length=202051 Score = 150 bits (166), Expect = 3e-30 Identities = 269/393 (68%), Gaps = 15/393 (4%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||| ||||| || || || |||| ||| ||||| || | ||| || | | ||| ||||| Sbjct 88242 CTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGA 88183 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 | |||||||||||| || | ||||| ||| | ||| || | ||| || | ||| Sbjct 88182 CGTGCCGTTGGTGCCAGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGGCC 88123 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||||| || ||| ||||||||| | || || | ||||| || || ||||||||||| Sbjct 88122 AATGCCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTCAGGGTATCATAGATGCCCTC 88063 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| |||||||||| | || ||||||||||| |||| | | |||||| Sbjct 88062 AATGCTGTCCTCCTTCATGTCAACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCC 88003 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839 ||||||||| ||||| |||| ||| ||| | ||| | ||||||| | |||||| Sbjct 88002 GGCATTGAACAGCGTTGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGT 87943 Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899 | || || | | | | | || ||| ||| || ||| | ||||| Sbjct 87942 CTCAAGAACCCTCTCGA-----TGTT----GTC------CCCCCAGATGCCAACAGCGAC 87898 Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCGACGAC 2073932 ||||| | ||||| ||| || ||||||||||| Sbjct 87897 ACGCATCAGCATGTGCTGTGGCCGCTCGACGAC 87865 Score = 116 bits (128), Expect = 6e-20 Identities = 356/544 (65%), Gaps = 26/544 (5%) Strand=Plus/Minus Query 2069251 TGGTCGACGGTAAACTGGAT-GGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCC 2069309 |||||||| || ||||| || |||| || || | | | | ||||| || ||||||||||| Sbjct 89645 TGGTCGACTGTGAACTGAATCGGCGCTGCCG-CTGCCTGTGTGCGGAGGTAGTACATGCC 89587 Query 2069310 GGTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCATTCGG 2069369 |||||||| || | ||| || | |||||| ||||| || | | | | Sbjct 89586 AGTCTTGAGACCCAGCTTCCAACCGGTGAAGTGCATGCTAGTGAT---CTTGCCCATAG- 89531 Query 2069370 GACGGCACA-----GTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCG 2069424 | ||| || || | ||| ||||||||| |||||||| ||| | || ||| Sbjct 89530 -AAGGCTCACGCATGTGTATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCG 89472 Query 2069425 GCCGCCATGT---CGATGGTCACGCGGTTGGACACCTCCCACACGGTCTTGAACAGGGCC 2069481 || ||||| | |||||||| | | || | |||||| ||||||||| | |||||| Sbjct 89471 GCAGCCATCTGCACGATGGTC---CTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCC 89415 Query 2069482 TTGAGATGCGGCGGCACCTCGTCGTCATCAAAGCC-CTGCACCGAGCCCTGCGCTGCGAT 2069540 |||| | || || | | | || ||| | ||||| | | | ||||| Sbjct 89414 TTGATGT-------CATCTGGGATGCTGCGAATATTCTGGATAGAGCCATCCTCAGCGAT 89362 Query 2069541 GAGGCGGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTG 2069600 || ||||| | ||| | |||||| || | | || || || || ||| Sbjct 89361 GATGCGGTTCTTCAGGTCCTCAGACCACAGACCACACTGCACCAGATCCTTGAGCAGCCA 89302 Query 2069601 GCGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGAT 2069660 | ||||| || || ||||| | ||||||||||||| ||||||||| || Sbjct 89301 TGGATTGACAACTTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATA 89242 Query 2069661 GACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGC 2069720 | ||| | |||| ||||||||||||||||||| |||| ||| ||||||||| |||| Sbjct 89241 GGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGC 89182 Query 2069721 CACGAGCAGCGAGTTGCGCAGGCCGTACTGTCGCACCAGCGCCCGCAGGGCGTCCCAGTC 2069780 || | || |||||| | |||| ||| | | ||| || |||||||||||| Sbjct 89181 CATCAACAAGCTGTTGCGGACACCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTC 89122 Query 2069781 CCAG 2069784 |||| Sbjct 89121 CCAG 89118 Score = 114 bits (126), Expect = 2e-19 Identities = 287/439 (65%), Gaps = 10/439 (2%) Strand=Plus/Minus Query 2071570 GAAAACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCT 2071627 ||| ||| || || ||| ||||| ||||||| | || ||||||| ||||||| || Sbjct 88685 GAATACTCGATGATCTCAGTGCAAAGGTTGGAG--CTGCGAATGGTGCCAAGGTTCTTCT 88628 Query 2071628 GGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCT 2071687 ||||||| | ||||| || ||||||| || |||| |||| || |||||| | | Sbjct 88627 GGTTGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAGGGGTTGCCTGTCTCGGTTT 88568 Query 2071688 GCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCG---CGCGGC 2071744 | ||| || |||||| |||| | | |||| || |||| | |||| | Sbjct 88567 GAGCCTCGAGGATGGCATACCAGAGCTTCTGCGCCTTCAG---GGTCTTTTGGCCGCGAC 88511 Query 2071745 CCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGC 2071804 ||| | || || || || | |||||| ||| ||| |||| Sbjct 88510 CCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGGC 88451 Query 2071805 CGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAA 2071864 |||| |||| ||||| | || | |||||||||| || | || || ||| | Sbjct 88450 CGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCTACACGCTTCATGA 88391 Query 2071865 ACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGT 2071924 | || || |||| ||| | ||||| || || || ||| ||| ||||| |||| Sbjct 88390 AGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCGT 88331 Query 2071925 GGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGG 2071984 ||||||| ||||||||| | |||| || || |||||||| |||||||||||| || Sbjct 88330 GGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATGG 88271 Query 2071985 CAAAGGCGCCCTTGCGCTT 2072003 |||| || || |||||| Sbjct 88270 CAAAAGCACCGGGGCGCTT 88252 >seq2 Length=555894 Score = 132 bits (146), Expect = 8e-25 Identities = 274/405 (68%), Gaps = 2/405 (0%) Strand=Plus/Minus Query 2018920 GGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCCGTTG 2018979 || |||| || |||||||| | ||||| || || || ||||||| | || | | Sbjct 72036 GGGTCGAGAAATACCGCCCCGTCTTCCTCGATGATATAGTCGGCAACGTCGAGACCATCG 71977 Query 2018980 CCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGC 2019039 |||||| | ||| |||||||| |||||| || || | | | || || Sbjct 71976 AGCGGCTCAAGATCATCGCCAAGGACGGCAATATGCCCCACGTCATTATCTCCGGGATGC 71917 Query 2019040 CCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCG 2019099 | || | |||||||| || | ||||||||||||| ||| | || | || Sbjct 71916 CAGGTATCGGCAAGACGACCTCGGTGCTGTGCCTGGCGCGCCAGCTGCTCGGTGATGCGT 71857 Query 2019100 CCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTA 2019159 | | ||||| || ||||| || ||||| ||||| |||||||| | ||||||||||| | Sbjct 71856 ACAAGGAGGCGGTCCTCGAGCTGAATGCCTCAGATGAGCGCGGAATCGACGTCGTGCGCA 71797 Query 2019160 GAATCATCAAGCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGA 2019219 ||||||| | ||| ||| | || ||||||| | |||||||||||| | Sbjct 71796 ACCGCATCAAGGGTTTCGCGCAGAAGAAGGTCACCCTGCCGGCGGGCCGCCACAAGATCG 71737 Query 2019220 TCATCCTCGATGAGGCCGACTGCCTTACG-TCGGCGGCCCAGCAGGCCCTCCGATCGACC 2019278 ||||||| |||||||||||| || | ||| |||| || |||||||| || || ||| Sbjct 71736 TCATCCTTGATGAGGCCGACAGCATGACGAGCGGC-GCGCAGCAGGCACTGCGGCGGACA 71678 Query 2019279 ATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAAC 2019323 ||||| | ||| | || || ||||| || || | || || ||| Sbjct 71677 ATGGAGATCTACTCGAATACCACGCGCTTCGCCTTCGCATGTAAC 71633 >seq14 Length=351483 Score = 116 bits (128), Expect = 6e-20 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671 |||||||||| | || || ||| | ||||| || ||||||||| | ||||||||| Sbjct 172313 AGGTCGACCAGGAGATGCTTTTCGAGATCATCCTGGCTGCCAACTACATGGACATCAAGG 172254 Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731 ||||||| || | || |||||||| || |||||| | || ||||||||||| || |||| Sbjct 172253 CCCTCCTTGACGTTGGCTGCAAGACTGTCGCCAACATGATTAAGGGCAAGTCTCCAGAGG 172194 Query 2035732 ACATCCGCAAGACCTTTAACAT 2035753 | || |||||||| || ||||| Sbjct 172193 AGATTCGCAAGACTTTCAACAT 172172 >seq86 Length=153077 Score = 111 bits (122), Expect = 2e-18 Identities = 179/253 (71%), Gaps = 6/253 (2%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| ||||||||||| || | | Sbjct 136680 TGACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTCCCGCCAA 136621 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| |||||| | ||| ||||| | | | |||| ||||||| |||| Sbjct 136620 GGGAGATGTTCTCCATGAAGTCGAAAGGGTTAGTAGACTTGTAGATCTTCTCGTTGCCGA 136561 Query 794011 G--CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 | ||||| || || ||||||||||||||||| |||||||| ||| | | ||| || Sbjct 136560 GAGCGACG--AGGAGACGGTCGGCGACGAATTCGATGTACTGCTTCATCAAGTTGGCATT 136503 Query 794069 CATGCCGATGAGCGC-CACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGG 794127 |||||||| || || ||| |||| | |||| | | ||||| ||||| || | || | Sbjct 136502 CATGCCGAGCAGGGCACAC-GGCAAGGCCTCGGTCAGGAACTCCTTCTCAATGGCAACAG 136444 Query 794128 CCTCGATGATGAT 794140 | ||| | ||||| Sbjct 136443 CATCGGTAATGAT 136431 >seq124 Length=113592 Score = 105 bits (116), Expect = 1e-16 Identities = 121/160 (76%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 1485546 GGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC-GCCAGGCGGCCGG 1485604 ||||||||||||||||| | ||| ||| ||| || || || ||||| || || Sbjct 14861 GGTCTGGATCTCGCGGGAGGAGATGGTGGACTTCTTATT-GTAGGCAGCCAGCTTGCTGG 14803 Query 1485605 CCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATT 1485664 |||| ||| ||| || |||| ||||||||||| |||||||||| ||| ||||| | Sbjct 14802 CCTCAGTGGCGACACGCTCGAAGATGTCGTTGACGAACGAGTTCAGGATGGACATGGCAC 14743 Query 1485665 TGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||||||| || ||||||||| ||||||||||| || Sbjct 14742 GGTTGGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGAC 14703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916144918668806