Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq27 87.8 7e-12 >seq27 Length=255484 Score = 87.8 bits (96), Expect = 7e-12 Identities = 119/163 (73%), Gaps = 5/163 (3%) Strand=Plus/Plus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | || || ||||||||||| ||||| || | |||||||||| ||||| Sbjct 17518 CTCGATCAAGTGAGCAATGGTCATACGAGATGGAATAGCGTGCGGGTTGATGATGATGTC 17577 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATAT-CTTCTTCAGGTACAATCAAACCAA 309802 || | || || | || |||||||||| | || || | |||| | | ||||| Sbjct 17578 TGGCGTGATACC---CTCTCGGGTGAAAGGCATGTCCTCCTGCCGGTA-GGTGACACCAA 17633 Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 |||| ||||| ||| |||| | ||| || |||||||| ||||| Sbjct 17634 TAGTACCCTTCTGACCGTGGCGGGAGGCGAACTTGTCCCCAAT 17676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951950540772912