Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq42 100 2e-16
seq104 86.0 5e-12
>seq42
Length=213763
Score = 100 bits (110), Expect = 2e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
||||| |||| || || ||||| || || || ||||| || || | | ||| ||
Sbjct 68266 CGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCG 68207
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| ||||| || |||||||| | |||| | || || || || ||||||||||| |||
Sbjct 68206 TCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGAATACCCTCCTTG 68147
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | || |||||| | || | ||||| ||| || || ||||| || |||
Sbjct 68146 TCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATA 68087
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || | ||| || || || ||||||||
Sbjct 68086 GTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 68052
>seq104
Length=128129
Score = 86.0 bits (94), Expect = 5e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 29557 TGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCC 29616
|| || || | || |||||||||||| || ||||| || || || |||||||| || ||
Sbjct 59426 TGCCCACCACGCAGACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCA 59485
Query 29617 GCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGC 29676
| | || || || || || || ||||| || | || | | ||||| || ||
Sbjct 59486 GACAGCGTCCGGCCGTCTTCCAGCTGCTTGCCCGCGAAGATAAGACGCTGCTGGTCTGGG 59545
Query 29677 GGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTC 29735
||||||||||| |||||||| ||| || | || || | || | || || || |||
Sbjct 59546 GGAATACCCTCCTTGTCTTG-AATCTTGGCCTTCACGTTGTCGATCGTATCCGATGATTC 59604
Query 29736 TACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || ||||| || | ||| || || || || |||||
Sbjct 59605 CACCTCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 59655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385214721104514
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |