Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq50 376 2e-99 seq104 129 6e-25 seq42 118 1e-21 seq8 93.3 4e-14 >seq50 Length=202051 Score = 376 bits (416), Expect = 2e-99 Identities = 973/1454 (67%), Gaps = 44/1454 (3%) Strand=Plus/Minus Query 148258 GATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACG 148317 |||| || || || |||||||| ||||||||||| ||| |||| | |||| ||| | | Sbjct 89299 GATTGACAACTTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGG 89240 Query 148318 GTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTA 148377 | ||||| ||||||||||||||| ||||||| |||| || ||||||||| ||| | Sbjct 89239 GCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCA 89180 Query 148378 CCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCC 148437 || || |||||| | |||| | | || || ||| ||||| || ||||||||| Sbjct 89179 TCAACAAGCTGTTGCGGACACCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCC 89120 Query 148438 AGAGCGGCGACGG--TGTCA-CGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGCGG 148494 |||| || || || || ||||||||||||||||||||| || || || ||| Sbjct 89119 AGAGATCAGAGGGCTTGACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGG 89060 Query 148495 GGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGA 148554 | |||||||| || ||| || || | || || | || || || || Sbjct 89059 GAGATCCCTCGTATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGA 89000 Query 148555 GCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTC-GCT- 148612 | ||| ||| ||| || |||||| || ||| |||| |||| | | ||| | | Sbjct 88999 GGGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTT---CAGCTCACGAGCCTCAGGTG 88943 Query 148613 -TTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAA 148671 ||| | ||||| || || || || || ||||| || ||||| ||||||||||||| Sbjct 88942 ACTCGAAAGGCATGCGGAGGGCCAAGAAAGCATCGGCCAGACCCTGGACGCCCACGCCAA 88883 Query 148672 TGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGATAGTGGTTGCGGTCG 148730 | || ||||| |||||| ||| || ||| || | |||||||||||| ||| Sbjct 88882 TAGGACGGTGGCGCATGTTGCTCTTGCGGGC-CTCCGGAACAGGATAGTGGTTGATATCG 88824 Query 148731 ATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAA---A 148787 |||||||||| || ||||| || || |||| || | | | ||||||| | || | Sbjct 88823 ATGATCTTGTTCAGGTTGCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGTTA 88764 Query 148788 TCG---TACTTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACACG 148844 | | | || || | ||| | | | || ||||||||| || || ||||| || Sbjct 88763 TAGCGCTCATTCTCGTAGTCGACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACA 88704 Query 148845 GCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATT---GCTGCATTTG 148901 || |||||| || || ||||| | |||||| | ||| || || ||||| || Sbjct 88703 GCAACCTCATCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATG 88644 Query 148902 ATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCG-TCCTTGTACAGCATGTA 148960 | ||| | |||||| || |||||||||| |||| || | |||||||||| |||| | Sbjct 88643 GT---GCCAAGGTTCTTCTGGTTGCTCTTGCGGTTG-GCGTGATCCTTGTACAACATGAA 88588 Query 148961 CGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AACCGATGCAGGTCCTGCGCGCGC 149018 || ||| || || || | || | ||| | | | || | |||||| | Sbjct 88587 GGGGTTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCA--GAGCTTCTGCGCCTTC 88530 Query 149019 ACTTGCTGCTCGTAGCGACCCTCCTGCTCGTA--TAAAGTATACAGCCGCTCGAACGCCT 149076 | || | | ||||||||| ||||||| | ||| | ||| ||||||| ||| Sbjct 88529 AGGGTCTTTTGGCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGC--CTCGAACTCCT 88472 Query 149077 CGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGT 149136 |||||||||| ||| | || |||||||||| || |||||||| || | ||| |||||| Sbjct 88471 CGCCGTAGCAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGT 88412 Query 149137 CCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCG 149196 | | || |||||||| || ||||| || | |||||| || | |||||| || | Sbjct 88411 TCTTCTCTACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAG 88352 Query 149197 CCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGT 149256 | | ||||| || ||| ||||||| ||| | ||| | || |||| Sbjct 88351 CACGGACCTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGT 88292 Query 149257 GCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGGTCGACGT 149313 |||| ||||| | ||| | || | || || |||| ||||| ||||| ||||||| Sbjct 88291 GCCATGGCTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGT 88232 Query 149314 GGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAG 149373 || | ||||||| || || || | |||||| |||||| ||| |||||||| | Sbjct 88231 ATCGGGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGG 88172 Query 149374 T-AGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCC- 149431 | ||| ||| |||| || || | ||| ||||||| ||| ||||| || Sbjct 88171 TGCCAGC-GATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGGCCAATGCCTCCA 88113 Query 149432 GCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGT 149490 ||| | ||| ||||| || || ||| | || || ||||||||||| ||||||| Sbjct 88112 GCCAT-CTTGGAGATCATGGCACAGGTCTTC-AGGGTATCATAGATGCCCTCAATGCTGT 88055 Query 149491 CGCGCTTCATGGTCAGC-AGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCG 149549 | |||||| |||| | || |||||||| ||| |||| | |||||||||| | Sbjct 88054 CCTCCTTCAT-GTCAACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTG 87996 Query 149550 AACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGACTCGAGC 149609 |||| || || |||||||| || | || | | ||| | ||| | ||| || Sbjct 87995 AACAGCGTTGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAAGA 87936 Query 149610 ACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGT 149669 || | || |||| || || |||||| | ||||| ||||||||||| ||||| || Sbjct 87935 ACCCTCTCGATGTTGTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGGC 87876 Query 149670 CGCTCCGCCACTTT 149683 ||||| | ||||| Sbjct 87875 CGCTCGACGACTTT 87862 >seq104 Length=128129 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | ||| | | | |||||||||||||| || Sbjct 59915 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCCTCGAGCTGCTTACC 59973 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || ||||||||||| ||||||||||| |||||||| |||||| ||| Sbjct 59974 AGCGAAAATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTT 60033 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | || ||| || || | |||| ||| |||||||| || || Sbjct 60034 GACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGT 60093 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 60094 CTTGACGAAGATCTGCAT 60111 Score = 102 bits (112), Expect = 8e-17 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| || || ||| || || || || |||||||||| Sbjct 59459 GTCGACTCCTTCTGAATGTTGTAGTCAGACAGCGTCCGGCCG--TCTTCCAGCTGCTTGC 59516 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 ||||| | || || ||||||||||| || || || || |||||||| ||||| || Sbjct 59517 CCGCGAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGAATCTTGGCCT 59576 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||| || | | ||||| |||| ||||| || ||||| ||||| | Sbjct 59577 TCACGTTGTCGATCGTATCCGATGATTCCACCTCGAGGGTGATCGTCTTGCCCGTCAGGG 59636 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| || ||||| Sbjct 59637 TCTTGACGAAGATTTGCAT 59655 >seq42 Length=213763 Score = 118 bits (130), Expect = 1e-21 Identities = 148/201 (74%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520 ||||||||| ||||| || ||||| ||| | || ||| |||||||||||||||| Sbjct 68249 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT--ACGGCCGTCCTCGAGCTGCTTG 68192 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || || ||||| ||||| || || || || |||||||| |||||| | Sbjct 68191 CCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTGGCC 68132 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | || | ||||||| | |||||| || | ||||| || ||||| || || Sbjct 68131 TTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGG 68072 Query 133641 GTTTTTACGAAAATCTGCATG 133661 || || ||||| ||||||||| Sbjct 68071 GTCTTGACGAAGATCTGCATG 68051 >seq8 Length=406722 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| ||| | || | ||||| || || |||||||| || |||||| Sbjct 173776 TCCTCAAGCTGCTTGCCGGCGAAGATCAATCGCTGTTGATCCGGAGGGATACCCTCCTTG 173717 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||||| | |||||| || | ||||| Sbjct 173716 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATA 173657 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAA 133651 || ||||| ||||| || || ||||| Sbjct 173656 GTCTTGCCCGTCAGGGTCTTCACGAA 173631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483415035206960