Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq50 223 3e-53 >seq50 Length=202051 Score = 223 bits (246), Expect = 3e-53 Identities = 961/1501 (64%), Gaps = 30/1501 (2%) Strand=Plus/Minus Query 146891 GATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAG 146950 ||||||| ||||| |||||||| || ||||| || | |||| | ||| || | | Sbjct 89299 GATTGACAACTTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGG 89240 Query 146951 GCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCA 147010 ||||||| |||| || ||||| | || || | || | || || |||||| ||||| Sbjct 89239 GCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCA 89180 Query 147011 CCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCC 147070 |||||| || || | ||||| | ||| ||| ||||||| | | |||||||| Sbjct 89179 TCAACAAGCTGTTGCGGACACCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCC 89120 Query 147071 ACATCGACGAGGGCGTCAC---GTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGG 147127 | | |||||| | || |||||||||||||||||| || | || | | ||| Sbjct 89119 AGAGATCAGAGGGCTTGACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGG 89060 Query 147128 GACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGA 147187 || || || | | | |||| || || || || | ||||| ||| || Sbjct 89059 GAGATCCCTCGTATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGA 89000 Query 147188 GCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCT 147247 | || | | ||| ||||| ||| ||| || ||||| || | || || || Sbjct 88999 GGGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACT 88940 Query 147248 CGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAG 147307 || ||||||| || || || || |||||||||| |||||||| || ||||| |||| Sbjct 88939 CGAAAGGCATGCGGAGGGCCAAGAAAGCATCGGCCAGACCCTGGACGCCCACGCCAATAG 88880 Query 147308 GTCGATGCTTTTCGTTGCTGCGCTT-CGCGCT--CGCTATGGGATAGTGGTTGCGATCAA 147364 | || || |||||| ||| || || || | |||||||||||| ||| | Sbjct 88879 GACGGTGGCGCATGTTGCT---CTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCGA 88823 Query 147365 TAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCAT 147424 | |||||||| ||||| || || || || | || | | | || || ||| | || Sbjct 88822 TGATCTTGTTCAGGTTGCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGTTAT 88763 Query 147425 AAGTCCCGTCTTCG-ACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACG 147483 | | | | ||| | || ||| | || || ||||||||||||||| |||||||| Sbjct 88762 AGCGCTCATTCTCGTAGTCG-ACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACA 88704 Query 147484 GCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATG 147543 || ||| || | | |||| | ||| || | ||| |||||| || ||| Sbjct 88703 GCAACCTCATCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATG 88644 Query 147544 ACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCG-TCTTTGAAGAGCATGTACGG 147602 || | || | ||| ||||| || || ||| || | || ||| | | |||| | || Sbjct 88643 GTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGG-CGTGATCCTTGTACAACATGAAGGG 88585 Query 147603 TCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCTCGCAC 147659 ||| |||||| ||| | || | ||| | ||| || | |||||| || Sbjct 88584 GTTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGC---TTCTGCGCCTTCAG 88528 Query 147660 CCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCC 147719 || | ||| |||||| |||||| |||||||| ||| ||||| ||||| Sbjct 88527 GGTCTTTTGGCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCC 88468 Query 147720 GTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGC 147779 |||||| |||||||||||||| |||| | || |||||||| | ||| | ||| | Sbjct 88467 GTAGCAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTT 88408 Query 147780 GTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTT 147839 | || || ||| || |||||||| | ||| || || | || || || || Sbjct 88407 CTCTACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACG 88348 Query 147840 GCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCA-CGCTATAGATGTCGGCGTGCC 147898 | || || || ||| || | || | | | | ||| || ||||||| Sbjct 88347 GACCTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGA-AGACATCAGCGTGCC 88289 Query 147899 AGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCGACATGGC 147955 | || || | ||||| ||| | ||||| ||||| || ||||| ||||| | | Sbjct 88288 ATGGCTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATC 88229 Query 147956 GCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGG 148015 | | ||||||| || || |||| ||| || | ||| | | |||||||||||| Sbjct 88228 GGGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGC 88169 Query 148016 AATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCC-GCCG 148074 | ||| | | |||| ||| || | ||| ||||| | ||||||||| || ||| Sbjct 88168 CAGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGGCCAATGCCTCCAGCCA 88109 Query 148075 TACTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTAGATGCCGTCGATGCTGTCGT 148132 | ||| || || || ||| | | || || |||||||| || |||||||| | Sbjct 88108 T-CTTGGAGAT--CATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCT 88052 Query 148133 TTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAA 148192 || | | ||| | || ||||| ||| |||| |||| || || ||| | Sbjct 88051 CCTTCATGTCAACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACA 87992 Query 148193 GGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGT 148252 | || || |||||| || || || || | ||| | || ||||||| | | Sbjct 87991 GCGTTGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAAGAACCC 87932 Query 148253 CTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTT 148312 ||||||| ||| || ||||| | ||||| ||||| |||||||||||||| || | Sbjct 87931 TCTCGATGTTGTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCT 87872 Query 148313 CGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGT 148372 || | |||| | ||||| ||||| ||||| | |||||||| ||| | ||||||| Sbjct 87871 CGACGACTTTACCGTTGAGTTTGAGGAGATACGAACGCTCGAGGGTCTTGAAGCCAAAGT 87812 Query 148373 A 148373 | Sbjct 87811 A 87811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476605516411440