Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq121 140 4e-28 >seq121 Length=115632 Score = 140 bits (154), Expect = 4e-28 Identities = 277/405 (68%), Gaps = 4/405 (1%) Strand=Plus/Minus Query 147102 GGCCACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCG 147160 || |||||| ||||| ||| | |||||||||||||||||||||||| ||||||| Sbjct 106189 GGACACGTAGAACTGCGCAAAC-ATGTGGCACGGCGGCAGCGCCATGATCTTCAGGTCCT 106131 Query 147161 CGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGA 147220 ||||||||| || | | | ||||| | | |||||| || | || | | Sbjct 106130 TGGGGTTCCACGCGCTCAGGATGATCCGCCGGTCGTACGGGTTCGTCCGGAGCTTGTGCA 106071 Query 147221 TAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGC-AGTCCACGTAC 147279 ||| | ||||||||| ||||||||||| |||||| | | ||| ||| |||||| Sbjct 106070 CGACCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCG-CGCGCGCGTCGACGTAC 106012 Query 147280 CTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTG 147339 ||| || ||||||| ||||||||| |||||||| || || |||||||| | | | Sbjct 106011 TCGGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCGTCGCGG 105952 Query 147340 TGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACT 147399 |||| | |||| | | | || ||| || | || |||| | ||||||| || || Sbjct 105951 TGCGCCAGGCCCACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAAATCTTGACG 105892 Query 147400 CCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCC 147459 |||| ||| |||| | || ||| | |||| | ||||||||| ||||| || Sbjct 105891 CCCTGCGCGCTGAGCGGCAGCGACGACGTCGCGCCCGACACGAACCAGAGGAGCTCGGCC 105832 Query 147460 AAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAAC 147504 | ||| ||| || || | |||||| || ||||| ||| || Sbjct 105831 AGCACCGCCCGGTGGAACACGCGCTTGGTCGTGAGCAGCGGGTAC 105787 Score = 129 bits (142), Expect = 7e-25 Identities = 137/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 146906 CCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGT 146965 ||||||| | |||| | |||||||||| | ||||||||||||||| |||| | || Sbjct 106478 CCAGCTGCGTCCTCAGCGCGTCCACGTGGTCCACGTAGACGTGCGCGTCGCCCATGACGT 106419 Query 146966 GCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGT 147025 || | | ||||| ||| || |||||| || | ||||| || ||||||| || Sbjct 106418 GCGTCAGGCTGCCCGGGACGAGGTCGCACACGTGCGCGATCATGTGCGTCAGCAGCGCGT 106359 Query 147026 AGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGC 147085 ||||||| |||||||| || || || ||||||||||| | |||| |||||||||||||| Sbjct 106358 AGCTGGCGATGTTGAACGGCACGCCGAGGCCCATGTCGCAGGACCGCTGGTACAGCTGGC 106299 Query 147086 A 147086 | Sbjct 106298 A 106298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583481041905600