Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq50 163 4e-34 seq2 147 3e-29 seq86 131 2e-24 >seq50 Length=202051 Score = 163 bits (180), Expect = 4e-34 Identities = 271/393 (69%), Gaps = 15/393 (4%) Strand=Plus/Plus Query 259790 GTCGTCGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCC 259849 |||||||||||||| ||| | ||||| ||||||||||| ||||| | ||| | | Sbjct 87865 GTCGTCGAGCGGCCACAGCACATGCTGATGCGTGTCGCTGTTGGCATCTGGGGG---GAC 87921 Query 259850 GACGTCGACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTG 259909 || |||| | | || ||| |||||| | |||||| | |||| Sbjct 87922 AACATCGAGAGGGTTCTTGAG------------ACCTACAACTACATGTCCAACAAGTTC 87969 Query 259910 TTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCG 259969 ||||| ||| |||| ||||| || |||||||||||||| | ||||| |||||| Sbjct 87970 TTCACACACGCGTCGCCAACGCTGTTCAATGCCGGCACGCCTCAGGCGCAGTTGTCGTCG 88029 Query 259970 TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029 ||||| || | |||||||||| || || |||||||||||||| || || ||| Sbjct 88030 TGCTTCCTCGTTGACATGAAGGAGGACAGCATTGAGGGCATCTATGATACCCTGAAGACC 88089 Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCC 260089 || || | ||||||||| ||| || ||||| || | || ||| | || ||| Sbjct 88090 TGTGCCATGATCTCCAAGATGGCTGGAGGCATTGGCCTCAACGTCCACCGCATCCGTGCC 88149 Query 260090 GCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGC 260149 | ||| ||||| | || |||||||||||| |||||| ||| | | || ||| | || Sbjct 88150 ACCGGCTCCTACATCGCTGGCACCAACGGCACGTCCAATGGCATCATCCCTATGTTGCGT 88209 Query 260150 GTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 || || ||| |||| || || |||||||| ||| Sbjct 88210 GTCTTCAACAACACTGCCCGATACGTCGATCAG 88242 Score = 116 bits (128), Expect = 5e-20 Identities = 356/542 (66%), Gaps = 20/542 (4%) Strand=Plus/Plus Query 262878 CTGGGACTGGGACGCACTGCGGGCGTCGGTTCGACAGCATGGCCTGCGCAACTCGTTGCT 262937 ||||||||||||||| || ||| | | ||||| || | |||||| ||| | Sbjct 89118 CTGGGACTGGGACGCCTTGAAGGCCAAGATCAAGCAGCACGGTGTCCGCAACAGCTTGTT 89177 Query 262938 CGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCGA 262997 |||||| ||||||||| ||| |||| ||||||||||||||||||| |||| || || Sbjct 89178 GATGGCGCCCATGCCCACTGCCTCGACTTCGCAGATCCTGGGCAACAACGAGTGCTTTGA 89237 Query 262998 GGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCAA 263057 | | || ||||||||| ||||||||||||| | ||||| || || ||||| Sbjct 89238 GCCCTATACATCCAACATCTATCAGCGCCGCGTGCTCGCTGGCGAGTTCCAAGTTGTCAA 89297 Query 263058 CCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCGACCG 263117 | ||| ||||| ||||| | | || |||||| | ||| | |||| Sbjct 89298 TCCATGGCTGCTCAAGGATCTGGTGCAGTGTGGTCTGTGGTCTGAGGACCTGAAGAACCG 89357 Query 263118 GCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGATCT 263177 |||| || | | ||||| | ||| || || || | | || || | Sbjct 89358 CATCATCGCTGAGGATGGCTCTATCCAGAATATT--CG--CAGCA--TCCCAGATGACAT 89411 Query 263178 CAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTG---ATATGGC 263234 |||||| |||| ||||||||| |||||| | | | | |||||| | | ||||| Sbjct 89412 CAAGGCCCTCTACAAGACCGTCTGGGAGAT---CTCGCAGAGGACCATCGTGCAGATGGC 89468 Query 263235 GGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGACC- 263293 ||||| || | ||| |||||||| ||||||||| ||| | || | || | Sbjct 89469 TGCCGATCGTGGTGCCTTCATCGACCAGTCCCAGTCGCTGAACATACACATGCGTGAGCC 89528 Query 263294 --CGACGGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAGAC 263351 | | || | || ||||| |||||| | | ||| | || |||||||| Sbjct 89529 TTCTATGGGCAAG---ATCACTAGCATGCACTTCACCGGTTGGAAGCTGGGTCTCAAGAC 89585 Query 263352 TGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCC-ATTCAATTCACCGTCGATC 263410 |||||||||||| || ||||| | | | || | || |||| ||||| ||||| ||||| | Sbjct 89586 TGGCATGTACTACCTCCGCACACAGGCAGC-GGCAGCGCCGATTCAGTTCACAGTCGACC 89644 Query 263411 AG 263412 || Sbjct 89645 AG 89646 >seq2 Length=555894 Score = 147 bits (162), Expect = 3e-29 Identities = 307/455 (67%), Gaps = 2/455 (0%) Strand=Plus/Plus Query 332876 CGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGGCC 332935 ||||| || ||||| ||| ||||| | |||||||| | | ||| ||| || || Sbjct 71583 CGCAGTATCGCACACCGGGACTGCAATGGCTCGATGATCTTGTTGGACTGGTTACATGCG 71642 Query 332936 AGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGGCC 332995 | ||| || ||||| ||||| | | | ||||| ||| ||| || ||||| || || Sbjct 71643 AAGGCGAAGCGCGTGGTATTCGAGTAGATCTCCATTGTCCGCCGCAGTGCCTGCTGCGC- 71701 Query 332996 GCCGG-CGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCAG 333054 |||| ||| | || ||||||||| || ||||||| |||||||||||| || |||||| Sbjct 71702 GCCGCTCGTCATGCTGTCGGCCTCATCAAGGATGACGATCTTGTGGCGGCCCGCCGGCAG 71761 Query 333055 ATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGCTC 333114 ||| | ||| ||| |||||| |||||||||||||| | |||||||| Sbjct 71762 GGTGACCTTCTTCTGCGCGAAACCCTTGATGCGGTTGCGCACGACGTCGATTCCGCGCTC 71821 Query 333115 GTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCGCACCCAAGAGGACGCGCGC 333174 || || || || || ||||| || ||||| | | || |||| | || |||||| Sbjct 71822 ATCTGAGGCATTCAGCTCGAGGACCGCCTCCTTGTACGCATCACCGAGCAGCTGGCGCGC 71881 Query 333175 CAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCCGCCAGCAAGAGGTTGGG 333234 ||||||| | || |||||||| | || ||| || | | | || || ||| Sbjct 71882 CAGGCACAGCACCGAGGTCGTCTTGCCGATACCTGGCATCCCGGAGATAATGACGTGGGG 71941 Query 333235 CATGTTGCCGTCGGCGGCCAGCGCCTTGAGGTAGGCAACGGCGTGCTCGTTGCCGACAAT 333294 ||| |||||||| ||| | |||||| | | || | |||||||||| || Sbjct 71942 CATATTGCCGTCCTTGGCGATGATCTTGAGCCGCTCGATGGTCTCGACGTTGCCGACTAT 72001 Query 333295 GTCGTCGAGCACCATTGGGCGGTACTTTTCGATCC 333329 || ||||| | | |||||||| || |||| || Sbjct 72002 ATCATCGAGGAAGACGGGGCGGTATTTCTCGACCC 72036 >seq86 Length=153077 Score = 131 bits (144), Expect = 2e-24 Identities = 234/336 (70%), Gaps = 7/336 (2%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||| |||||| ||||| |||||||| |||||| | |||| Sbjct 135764 GATTTGGCAAATGTAC-AAGAAGCACGAGGCGTCCTTCTGGACCGCTGAGGAGATTGACC 135822 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCA 1455891 | ||| | | ||||| | ||| ||| |||||| | |||||| Sbjct 135823 TGTCTAAGGACCTGCACGACTGGAACAACCGTTTGACCGATGACGAGAAATACTTCATCT 135882 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||| |||||||||| ||| ||||| || |||||||| ||| ||| || || Sbjct 135883 CCCACATCCTCGCCTTCTTT-GCCGCTTCGGACGGCATCGTTAACGAAAACTTGATCGAG 135941 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | |||||||| | || ||||| |||| || ||||| ||||||| | Sbjct 135942 CGCTTCAGTGCTGAGGTCCAGATTCCTGAGGCCCGTTGTTTCTACGGCTTCCAGACCATG 136001 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||||||||| || || ||||| |||||||| || || || ||||||| || Sbjct 136002 ATGGAGAACATCCACTCCGAGACTTACTCTCTCCTGATTGATACATATATCAAGGAGCCT 136061 Query 1456072 GTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACAC 1456106 | | || | ||| ||||||| |||||| || || Sbjct 136062 GCCCAG-CGCACCTACCTCTTCAACGCCATTGAGAC 136096 Score = 96.9 bits (106), Expect = 5e-14 Identities = 180/259 (69%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 ||||| ||| || || | || ||||| ||||| | | |||| | ||||| || Sbjct 136431 ATCATTACCGATGCTGTTGCCATTGAGAAGGAGTTCCTGACCGAGGCCTTGCCGTGTGCC 136490 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || |||||||||| |||| | | ||| |||||||| ||||| ||||||||||| | Sbjct 136491 CTGCTCGGCATGAATGCCAACT-TGATGAAGCAGTACATCGAATTC-GTCGCCGACCGTC 136548 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | |||| || |||||| || ||||| |||| | | | ||||| ||| | ||| Sbjct 136549 TCCTCGTCGCTCTCGGCAACG-AGAAGATCTACAAGTCTACTAACCCTTTCGACTTCATG 136607 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761 ||| ||||| || | || ||||||||||| |||||| || | ||| || ||| Sbjct 136608 GAGAACATCTCCCTTGGCGGGAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAG 136667 Query 1456762 AAGGCCGGCGTCACCGCCA 1456780 ||||| || |||| |||| Sbjct 136668 AAGGCTGGTGTCATGGCCA 136686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177719184946548