Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq104 125 7e-24
seq42 105 7e-18
seq8 84.2 2e-11
>seq104
Length=128129
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || ||||| |||||||| ||||| || ||||||||||||
Sbjct 59657 CCACCGCGGAGACGGAGGACAAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAC 59716
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || ||||| || || || || || | |||||||||||| || ||
Sbjct 59717 AGAGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGG 59776
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || || || ||| | ||||||||||| |||||
Sbjct 59777 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGACGACTCCACC 59836
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| || ||||| | ||| || ||||| || |||||
Sbjct 59837 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 59883
Score = 123 bits (136), Expect = 3e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|||||||| ||||| || ||||| || |||||||||||| | |||| | || |||
Sbjct 59903 ACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCG 59962
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| || || || ||||||| |||||||| || || || ||||| || || || ||
Sbjct 59963 AGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGG 60022
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| ||| | ||||| || || || || || ||||| ||||| ||
Sbjct 60023 ATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTCTTG 60082
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| | || || ||||| || ||||| |||
Sbjct 60083 CCGGTGAGGGTCTTGACGAAGATCTGCATCTTG 60115
Score = 113 bits (124), Expect = 5e-20
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|| |||| ||| | ||| ||||| || ||||| |||||||||||||| | || | || |
Sbjct 59438 AGACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGACAGC-GTCCG 59496
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
||| || ||||| ||||| || || || | ||||||||| || || || || || ||
Sbjct 59497 GCCGTCTTCCAGCTGCTTGCCCGCGAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTC 59556
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| |||||||| || || || ||| | || || || |||||||| ||||| ||
Sbjct 59557 CTTGTCTTGAATCTTGGCCTTCACGTTGTCGATCGTATCCGATGATTCCACCTCGAGGGT 59616
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || | || || ||||| ||||||||
Sbjct 59617 GATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 59655
>seq42
Length=213763
Score = 105 bits (116), Expect = 7e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| || ||||| || ||||| ||||| || |||||||||||| | ||| |
Sbjct 68269 AGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGG 68210
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| |||||||| ||||| || || |||| ||||| || || || || || || ||
Sbjct 68209 CCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGAATACCCTCC 68150
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || ||||| ||| | |||||||| || ||||| || || ||
Sbjct 68149 TTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTG 68090
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || | || || ||||| || |||||
Sbjct 68089 ATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 68052
>seq8
Length=406722
Score = 84.2 bits (92), Expect = 2e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| || |||||||||||| || ||| | || || ||||| ||||| || || |
Sbjct 173811 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 173752
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
|||| ||||| ||||| || || || || || || || || || || ||||| ||
Sbjct 173751 TCAATCGCTGTTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 173692
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | |||||||| || ||||| || || || || || || || || | || || ||||
Sbjct 173691 CGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGA 173632
Query 134704 A 134704
|
Sbjct 173631 A 173631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505392373124080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |