Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq50 248 1e-60 >seq50 Length=202051 Score = 248 bits (274), Expect = 1e-60 Identities = 1140/1779 (64%), Gaps = 46/1779 (3%) Strand=Plus/Minus Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390 |||||||||| || || |||| || ||||| |||||||| || |||||||| | Sbjct 89635 TGAACTGAATCGGCGCTGCCGCTGCCTGTGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 89576 Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CATG 110449 | | ||||| || | ||||| || || |||| ||| | || || | |||| Sbjct 89575 CCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAAGG-CTCACGCATG 89517 Query 110450 AAGAGGTTCAT--ACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAA 110507 | ||||| ||| |||| |||| |||||| || || | || ||||| | | Sbjct 89516 TGTATGTTCAGCGACTGGGACT--GGTCGATGAAGGCACCACGATCGGCAGCCATCTGCA 89459 Query 110508 TGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGA 110567 || | || | || ||||| || || ||||| |||||| |||||||||| Sbjct 89458 CGATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCATCTGGGA 89399 Query 110568 TATCTGAGA-TATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTG 110626 | ||| || |||||||||| || || || | | ||| | | ||||| |||| Sbjct 89398 TG-CTGCGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCTTCAGGTCCTCA 89340 Query 110627 GACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTG--TTGACAATGACAAACT 110684 ||||| |||||| || | || || |||| || | || ||||||| |||| Sbjct 89339 GACCACAGACCACACTGCACCAGATCCTTGAGCAGC--CATGGATTGACAACTTGGAACT 89282 Query 110685 CACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTAT 110744 | || ||||| | | | | |||||||| | ||| || || |||||||| || || | Sbjct 89281 CGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAGCACTCGTTGT 89222 Query 110745 TACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAA 110804 | |||| ||| || | || ||||| || ||||| || |||||||| | ||||| || | Sbjct 89221 TGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCTGTTGCGGA 89162 Query 110805 GACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTT--GGTTTC 110862 ||| | || |||||| |||| | | |||||||| || || | || || Sbjct 89161 CACCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCCAGA-GATCAGAGGGCTTG 89103 Query 110863 ACCTTC--CCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTT 110920 || || ||||||||| |||| || | || ||||| ||||||| ||||| | | | Sbjct 89102 ACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGGAGATCCCTCGTATGAT 89043 Query 110921 TCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATG 110980 |||| || | | | || | ||||| || |||| ||||| || ||| Sbjct 89042 GAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGGGCGGCGTGGTAGATG 88983 Query 110981 GTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGC 111035 || || ||||| | |||| ||| || ||| ||| || || |||| || Sbjct 88982 GTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACTCGAAAGGCATGCGGAGG 88923 Query 111036 GGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCA 111095 | || ||| |||| || ||||| || || |||| |||||||| | ||| |||| Sbjct 88922 GCCAAGAAAG-----CATCGGCCAGACCCTGGACGCCCACGCCAATAGGACGGTGGCGCA 88868 Query 111096 TATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGAT 111155 | || ||| || || | ||| ||||| || | || |||| ||| || | Sbjct 88867 TGTTGCTCTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCGATGATCTTGTTCAGGT 88808 Query 111156 TTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCG-AGTCTCT 111214 | || | || |||| ||| || || | | | | | | || | |||| Sbjct 88807 TGCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGTTATA-GCGCTCATTCTCG 88749 Query 111215 TCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTA 111274 | | ||| ||| ||| |||||||| || |||| ||||| ||||| |||||| | Sbjct 88748 TAGTCGACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACAGCAACCTCATCAGGA 88689 Query 111275 TCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTT 111334 | | ||||| | || || || || | |||||| || ||| || || | ||||| Sbjct 88688 GCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGTGCCAAGGTTCTTC 88629 Query 111335 TGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTC 111394 ||||| ||||| |||| ||||||||| | |||| |||| | || ||||| || Sbjct 88628 TGGTTGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAGGGGTTGCCTGTCTCGGTT 88569 Query 111395 TGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTT-GGCC-CGT 111451 || | | ||| || || | ||| | | || ||| || || | | || |||| || Sbjct 88568 TGAGCCTCGAGGATGGCATACCAGAGCTTCTGCGCCTT---CAGGGTCTTTTGGCCGCGA 88512 Query 111452 CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGA 111511 ||||| ||||||||| ||| || || || |||||||| || ||||| || Sbjct 88511 CCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGG 88452 Query 111512 CCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATG 111571 || || || || || || | |||| ||| | || | ||| || ||||||||| Sbjct 88451 CCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCTACACGCTTCATG 88392 Query 111572 AAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACC 111630 || || || || ||||| |||| ||||| || | | ||| || ||||||| | || Sbjct 88391 AAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGA-CCTCTTCCTTTCC 88333 Query 111631 TTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGAC 111690 ||||| || | || |||||||| | || ||| |||||||||||||| || |||| Sbjct 88332 GTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGAT 88273 Query 111691 TGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAA 111747 || | || || || | ||| | |||| || || || || ||| ||| || Sbjct 88272 GGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAA 88213 Query 111748 TACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGAT 111805 || || | ||| || || || |||| || || || || || ||| || ||| Sbjct 88212 GACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAG-- 88155 Query 111806 TTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGC 111865 |||| | | |||| || | ||||| || |||||| ||| ||||| Sbjct 88154 CCGGTGGCACGGATGCGGTGGACGTTGAGGCCAATGCCTCCAGCCATCTTGGAGATCATG 88095 Query 111866 GCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGG 111925 ||||| | | || || ||||||| || | || ||||||||| || | | ||| Sbjct 88094 GCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGG 88035 Query 111926 AAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGA 111985 ||||| |||| ||||| || || || |||||||| || ||||| | ||||| Sbjct 88034 AAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGT 87975 Query 111986 ATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 112044 |||| | || | | |||||| | || ||| ||||| | || || |||| ||||| Sbjct 87974 GTGAAGA-ACTTGTTGGACATGTAGTTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCCC 87916 Query 112045 GTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 |||||| | ||||| ||||| | ||||| |||||| Sbjct 87915 CCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGG 87877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628024510718400