Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq50 298 7e-76 seq86 152 6e-32 >seq50 Length=202051 Score = 298 bits (330), Expect = 7e-76 Identities = 1114/1719 (65%), Gaps = 43/1719 (3%) Strand=Plus/Minus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 |||||||||| || ||| |||| || |||||||||||||| || |||||||| | Sbjct 89635 TGAACTGAATCGGCGCTGCCGCTGCCTGTGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 89576 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTC-CATG 117923 || ||||||| | | ||||| | | |||| | | || || | |||| Sbjct 89575 CCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAAGG-CTCACGCATG 89517 Query 117924 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 117983 | ||||| ||||| || ||||||||| || ||||| || ||||| | | Sbjct 89516 TGTATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAGCCATCTGCACG 89457 Query 117984 ACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATA 118043 | | || | ||| ||||| || ||| |||||||| ||| || ||||||||||| Sbjct 89456 ATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCATCTGGGATG 89397 Query 118044 TCCACGA-TATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGA 118102 | ||| |||| ||||| || ||| || | || ||| | | ||||| |||| || Sbjct 89396 -CTGCGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCTTCAGGTCCTCAGA 89338 Query 118103 CCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACTCA 118160 ||| |||||| || ||||||| | || ||| ||||||||| ||||| Sbjct 89337 CCACAGACCACACTGCACCAGATCCTTGAGCAGCCATGG--ATTGACAACTTGGAACTCG 89280 Query 118161 CCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 118220 || ||||| ||| | | ||||||| |||| || || |||||||||||||| ||||| Sbjct 89279 CCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAGCACTCGTTGTTG 89220 Query 118221 CCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGA 118280 |||| ||| || | || ||||| ||||||||||| ||||| | | |||||| |||| | Sbjct 89219 CCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCTGTTGCGGACA 89160 Query 118281 CCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAG----TTGAGCTTTGTCTC 118336 || | | | | || |||| | ||||||||||| || ||| | | | Sbjct 89159 CCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCCAGAGATCAGAGGGCT-TGAC 89101 Query 118337 CCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTC 118396 | |||||| || |||| |||||||| ||||| | || |||||||| ||| Sbjct 89100 ATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGGAGATCCCTCGTATGATGA 89041 Query 118397 ATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGT 118456 || ||||| ||||||| || | || | || |||||| ||||| || || || Sbjct 89040 GTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGGGCGGCGTGGTAGATGGT 88981 Query 118457 TTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATC-AAACGC--GAGTCGGCA 118513 || || || | |||| | ||||| || || ||| || | | || Sbjct 88980 CTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACTCGAAAGGCATGCGGAGGGC 88921 Query 118514 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 118573 ||| || |||| || ||||| ||||| || | |||||| || || || | ||| || Sbjct 88920 CAA---GAAAGCATCGGCCAGACCCTGGACGCCCACGCCAATAGGACGGTGGCGCATGTT 88864 Query 118574 AGACTTCCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 118630 ||| || || |||| || ||||| || ||||||| | | | || || || Sbjct 88863 GCTCTTGCG---GGCCTCCGGAACAGGATAGTGGTTGATATCGATGATCTTGTTCAGGTT 88807 Query 118631 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 118690 ||| |||| |||| ||| || ||| | | | | | | | | |||| | Sbjct 88806 GCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGTTATAGCGCTCATTCTCGTA 88747 Query 118691 ATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATC 118750 | ||| ||| || |||||||| |||||||| || || |||| |||||| | | Sbjct 88746 GTCGACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACAGCAACCTCATCAGGAGC 88687 Query 118751 AGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 118810 || ||||| || || || ||||| | ||| || || ||||||||| | |||||| || Sbjct 88686 AGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGTGCCAAGGTTCTTCTG 88627 Query 118811 ATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870 || ||| ||| ||||||||| | |||| | || | || ||||| ||||| Sbjct 88626 GTTGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAGGGGTTGCCTGTCTCGGTTTG 88567 Query 118871 GGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTT--GGCTCGCCC 118927 | || ||| || || | ||||| | || || || ||| | | || | | || || Sbjct 88566 AGCCTCGAGGATGGCATACCAGAGCTTCTGCGCCT---TCAGGGTCTTTTGGCCGCGACC 88510 Query 118928 CTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCC 118987 ||| ||||||||| ||| || || || ||||| || || | || | || || Sbjct 88509 CTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGGCC 88450 Query 118988 TGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAA 119047 || || | ||||| | |||| ||| | || || ||| || ||||||||||| Sbjct 88449 GGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCTACACGCTTCATGAA 88390 Query 119048 GAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTG 119107 ||| || ||||||||||| || |||||| || ||| || | ||||| | || || Sbjct 88389 GAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCGTG 88330 Query 119108 ATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGC 119167 || |||| || | || || | || ||| |||||||| || |||||||| | || Sbjct 88329 GTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGC 88270 Query 119168 GATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATAC 119224 | | || || | ||| |||| | || || | |||||| ||| || || Sbjct 88269 AAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGAC 88210 Query 119225 ACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTA 119282 ||| | ||| || ||||| |||| ||| ||| || || || ||| || ||| | Sbjct 88209 ACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAGCC--G 88152 Query 119283 TTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCG 119342 |||| | || ||||| || | ||||| || || ||| ||| ||||| || Sbjct 88151 GTGGCACGGATGCGGTGGACGTTGAGGCCAATGCCTCCAGCCATCTTGGAGATCATGGCA 88092 Query 119343 CACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAG 119402 || | | || | | ||||| || || || ||| |||| | | | ||||||| Sbjct 88091 CAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGGAAG 88032 Query 119403 CAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGAT 119461 || ||||| || ||||| || || || || ||||| || ||||| | |||||| | Sbjct 88031 CACGACGACAACTG-CGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGTGT 87973 Query 119462 GAACATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGA 119499 ||| | || | | |||||| | || |||||||| ||||| Sbjct 87972 GAAGA-ACTTGTTGGACATGTAGTTGTAGGTCT-CAAGA 87936 >seq86 Length=153077 Score = 152 bits (168), Expect = 6e-32 Identities = 304/445 (68%), Gaps = 4/445 (1%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| ||||| ||||||||||||||||| ||||||||| | | | ||| |||||||| Sbjct 136663 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTCCCGCCAAGGGAGATGTTCTCCATG 136604 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| | || || | || | || | | | | ||||||||| Sbjct 136603 AAGTCGAAAGGGTTAGTAGACTTGTAGATCTTCTCGTTGCCGAGAGCGAC-GAGGAGACG 136545 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 || | |||| | || ||||||| |||| | || ||||| |||| ||| ||| Sbjct 136544 GTCGGCGACGAATTCGATGTACTGCTTCATCAAGTTGGCATTCATGCCGAGCAGGGCACA 136485 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 || | || || | |||| ||||||||||| | ||||| || | |||||| | Sbjct 136484 CGGCAAGGCCTCGGTCAGGAACTCCTTCTCAATGGCAACAGCATCGGTAATGATGGCTTC 136425 Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTT-GAAGAGTTCCACGGCAAACTCCT 130025 | | || | ||| || | ||| || || | ||| || ||| || || Sbjct 136424 CACGCGCTGCTTGCTGGGGCGGTTGTTCAG-GTGTGAGAACAGCAAGCAGGCGAAGTCAG 136366 Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085 ||| |||||||||||||| ||||||||||| || |||||| ||| || ||||| |||| Sbjct 136365 TGTGCAGACCCTCGTCACGAGAGATGAGTTCGTTGGAGAAGGTCAGGCCAGGCATCAGAC 136306 Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145 | |||||||||| |||||| || | | || | |||| |||||| || || || ||| Sbjct 136305 CACGCTTCTTCAGCCAGAAGATGGAAGCGAAAGCGCCACTGAAGAAAATACCTTCGACAG 136246 Query 130146 ACGCGAACGCAAAGAGACGCTCAGC 130170 || || |||| || |||| ||| Sbjct 136245 CAGCAAATGCAACAAGGCGCTGAGC 136221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618427825160240