Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq96 105 2e-17 >seq96 Length=217617 Score = 105 bits (116), Expect = 2e-17 Identities = 421/659 (64%), Gaps = 9/659 (1%) Strand=Plus/Minus Query 349271 GCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGT 349330 ||||| || || || ||| | || || ||||||| |||||| || ||||| || |||||| Sbjct 70810 GCAAACGACCAGGGCAACCGTACCACCCCATCATTCGTTGCTTTCACCGACACAGAGCGT 70751 Query 349331 ATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGAT 349390 |||| || ||| |||| || || || | || || || | || || || || || Sbjct 70750 CTGATCGGCGATGCTGCGAAGAACCAGGTCGCCATGAACCCCCACAACACCGTCTTCGAC 70691 Query 349391 GCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACA---CAATCTGATCTAAAA 349447 || ||||| | |||||| | | || ||| ||| || | || | || Sbjct 70690 GCGAAGCGGTTGATTGGTCGCAAGTTCCAGGAC---TCTGAGGTGCAGGCCGACATGAAG 70634 Query 349448 CATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATAT 349507 || || || || | || | | | ||| || || || | || ||||| || | Sbjct 70633 CACTTCCCCTTCAAGGTCAT-CGAGAAG--GGAAGCAAGCCTGTCATCGAGGTCGAGTTC 70577 Query 349508 AAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATG 349567 || || || || || || ||||| || || || || ||||| | || ||| Sbjct 70576 AAGGGCGAGACCAAGCACTTCACCCCCGAGGAGATCTCCTCGATGGTCCTGACCAAGATG 70517 Query 349568 AAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCA 349627 || | ||||| || || | |||| || || | | ||||| | || || || Sbjct 70516 CGCGAGACCGCTGAGGCCTACCTGGGTGGCACCGTCAACAACGCTGTCGTCACCGTTCCT 70457 Query 349628 GCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTA 349687 ||||| || || || ||||||| || || || || || || ||||| || | Sbjct 70456 GCCTACTTCAACGACTCCCAGCGCCAGGCCACCAAGGACGCCGGTCTGATTGCTGGCCTC 70397 Query 349688 AATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAA 349747 || || || | || || || || ||||| || || || || || || || || || || Sbjct 70396 AACGTCCTCCGTATCATCAACGAGCCCACCGCAGCTGCCATCGCCTACGGTCTCGACAAG 70337 Query 349748 ATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTA 349807 | | ||| || || | |||||||| || | ||||||||||| || ||||| Sbjct 70336 AAGGTTGAGGGCGAGCGCAACGTCCTTATTTTCGACCTGGGTGGTGGTACCTTCGATGTT 70277 Query 349808 TCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACAT 349867 || || || || | || || || || || || || || | || ||||| || || || Sbjct 70276 TCCCTCCTGACTATCGAGGAAGGCATCTTCGAGGTCAAGTCCACCGCTGGCGACACTCAC 70217 Query 349868 CTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCG 349926 || ||||| || || || || || ||||| ||| || |||||||| ||||| || || Sbjct 70216 CTGGGTGGTGAGGACTTCGACAACCGTCTGGTTAACCACTTTGTTAATGAATTCAAACG 70158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515235878856062