Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq96 105 2e-17
>seq96
Length=217617
Score = 105 bits (116), Expect = 2e-17
Identities = 421/659 (64%), Gaps = 9/659 (1%)
Strand=Plus/Minus
Query 349271 GCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGT 349330
||||| || || || ||| | || || ||||||| |||||| || ||||| || ||||||
Sbjct 70810 GCAAACGACCAGGGCAACCGTACCACCCCATCATTCGTTGCTTTCACCGACACAGAGCGT 70751
Query 349331 ATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGAT 349390
|||| || ||| |||| || || || | || || || | || || || || ||
Sbjct 70750 CTGATCGGCGATGCTGCGAAGAACCAGGTCGCCATGAACCCCCACAACACCGTCTTCGAC 70691
Query 349391 GCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACA---CAATCTGATCTAAAA 349447
|| ||||| | |||||| | | || ||| ||| || | || | ||
Sbjct 70690 GCGAAGCGGTTGATTGGTCGCAAGTTCCAGGAC---TCTGAGGTGCAGGCCGACATGAAG 70634
Query 349448 CATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATAT 349507
|| || || || | || | | | ||| || || || | || ||||| || |
Sbjct 70633 CACTTCCCCTTCAAGGTCAT-CGAGAAG--GGAAGCAAGCCTGTCATCGAGGTCGAGTTC 70577
Query 349508 AAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATG 349567
|| || || || || || ||||| || || || || ||||| | || |||
Sbjct 70576 AAGGGCGAGACCAAGCACTTCACCCCCGAGGAGATCTCCTCGATGGTCCTGACCAAGATG 70517
Query 349568 AAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCA 349627
|| | ||||| || || | |||| || || | | ||||| | || || ||
Sbjct 70516 CGCGAGACCGCTGAGGCCTACCTGGGTGGCACCGTCAACAACGCTGTCGTCACCGTTCCT 70457
Query 349628 GCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTA 349687
||||| || || || ||||||| || || || || || || ||||| || |
Sbjct 70456 GCCTACTTCAACGACTCCCAGCGCCAGGCCACCAAGGACGCCGGTCTGATTGCTGGCCTC 70397
Query 349688 AATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAA 349747
|| || || | || || || || ||||| || || || || || || || || || ||
Sbjct 70396 AACGTCCTCCGTATCATCAACGAGCCCACCGCAGCTGCCATCGCCTACGGTCTCGACAAG 70337
Query 349748 ATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTA 349807
| | ||| || || | |||||||| || | ||||||||||| || |||||
Sbjct 70336 AAGGTTGAGGGCGAGCGCAACGTCCTTATTTTCGACCTGGGTGGTGGTACCTTCGATGTT 70277
Query 349808 TCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACAT 349867
|| || || || | || || || || || || || || | || ||||| || || ||
Sbjct 70276 TCCCTCCTGACTATCGAGGAAGGCATCTTCGAGGTCAAGTCCACCGCTGGCGACACTCAC 70217
Query 349868 CTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCG 349926
|| ||||| || || || || || ||||| ||| || |||||||| ||||| || ||
Sbjct 70216 CTGGGTGGTGAGGACTTCGACAACCGTCTGGTTAACCACTTTGTTAATGAATTCAAACG 70158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515235878856062
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |