Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq50 316 2e-81 seq90 179 4e-40 seq86 129 6e-25 >seq50 Length=202051 Score = 316 bits (350), Expect = 2e-81 Identities = 529/755 (70%), Gaps = 10/755 (1%) Strand=Plus/Plus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254 ||||| ||||| | || ||| || ||| || | | | || | |||||| ||| || Sbjct 87892 ATGCGTGTCGCTGTTGGCATCTGGGGGGACAACATCGAGAGGGTTCTTGAGACCTACAAC 87951 Query 53255 TTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAAT 53314 | ||| | | |||| ||| || ||||| ||||||| |||||||| || || ||| | Sbjct 87952 TACATGTCCAACAAGTTCTTCACACACGCGTCGCCAACGCTGTTCAATGCCGGCACGCCT 88011 Query 53315 CACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATC 53374 || | ||| ||||| |||||||| || | |||||||| ||| || || |||||| Sbjct 88012 CAGGCGCAGTTGTCGTCGTGCTTCCTCGTTGACATGAAGGAGGACAGCATTGAGGGCATC 88071 Query 53375 TACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434 || || || || ||| |||||| ||||||||| | | || || || || || || Sbjct 88072 TATGATACCCTGAAGACCTGTGCCATGATCTCCAAGATGGCTGGAGGCATTGGCCTCAAC 88131 Query 53435 TGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492 || | || ||||||| | |||| | ||| || || |||||| || ||| Sbjct 88132 G--TCCACCGCATCCGTGCCACCGGCTCCTACATCGCTGGCACCAACGGCACGTCCAATG 88189 Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552 | ||| | |||||| | || |||||||||||||| ||||| |||||| | |||||||| Sbjct 88190 GCATCATCCCTATGTTGCGTGTCTTCAACAACACTGCCCGATACGTCGATCAGGGTGGCA 88249 Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612 |||||| || | || ||||||||||| ||||| |||||||| || | | |||| Sbjct 88250 ATAAGCGCCCCGGTGCTTTTGCCATCTACCTGGAGCCATGGCACGCTGATGTCTTCGAGT 88309 Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTACA 53671 | ||||| ||||| ||| || || | |||||| | || ||| |||||||| || Sbjct 88310 TCCTCGACCTGCGGAAGAACCACGGAAAGGAAGAGGTCCG-TGCTCGTGACCTCTTCCTT 88368 Query 53672 GCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTG 53731 || || ||||| ||||| ||||||||| | || |||||| ||| || ||| ||| Sbjct 88369 GCCCTCTGGATCCCGGATCTCTTCATGAAGCGTGTAGAGAAGAACGGCGACTGGACTCTG 88428 Query 53732 ATGTGCCCGAACGAGTGCCCCGGCC-TCCAGGGTGTCTACGGTGAGGAGTTTAACGAGAT 53790 |||||||| |||||||||||||||| | | | || |||||| |||||||| | | | Sbjct 88429 ATGTGCCCCAACGAGTGCCCCGGCCTTGCCGACTG-CTACGGCGAGGAGTTCGAGGCTCT 88487 Query 53791 GTATCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTAT 53849 ||| || ||||| || | |||| ||| | | |||| | ||||||| || | | Sbjct 88488 GTACGAGAAGTACG-AGCGCGAGGGTCGCGGCCAAAAGACCCTGAAGGCGCAGAAGCTCT 88546 Query 53850 GGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATT 53909 || |||| |||||| || || ||||| || | || | ||||| ||||||||| Sbjct 88547 GGTATGCCATCCTCGAGGCTCAAACCGAGACAGGCAACCCCTTCATGTTGTACAAGGATC 88606 Query 53910 CGGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944 | |||| |||||||||||||||||| | ||| Sbjct 88607 ACGCCAACCGCAAGAGCAACCAGAAGAACCTTGGC 88641 Score = 111 bits (122), Expect = 2e-19 Identities = 304/454 (67%), Gaps = 25/454 (6%) Strand=Plus/Plus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||| | || | ||||||| ||||| || || ||||| | |||||| |||||||| Sbjct 89164 CGCAACAGCTTGTTGATGGCGCCCATGCCCACTGCCTCGACTTCGCAGATCCTGGGCAAC 89223 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| || ||||| || || |||||||||| | |||||| || || || ||| Sbjct 89224 AACGAGTGCTTTGAGCCCTATACATCCAACATCTATCAGCGCCGCGTGCTCGCTGGCGAG 89283 Query 55604 TT------TGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGG 55657 || ||||| ||| || | || ||||||| ||| | || |||| Sbjct 89284 TTCCAAGTTGTCA--ATC--CATGG--CTGCTCAAGGATCTGGTGCAGTGTGGTCTGTGG 89337 Query 55658 AACCCGCAGATCAAGA--CGGAT-ATTG-TGCGGAACGGGGGGTCCGTCCAGAATCT--G 55711 | | | |||| || || || | || ||| || || |||||||| | | Sbjct 89338 TCTGAGGACCTGAAGAACCGCATCATCGCTGAGGAT----GGCTCTATCCAGAATATTCG 89393 Query 55712 GAGATTCCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAG 55770 || ||| | | |||||| | ||| ||| || |||||||| | |||| || Sbjct 89394 CAGCATCCCAGATGACATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCGCAGAGGAC 89453 Query 55771 TCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACAT 55830 | | | ||| ||| ||||||||||| | |||||||||||||||||| |||||||| Sbjct 89454 CATCGTGCAGATGGCTGCCGATCGTGGTGCCTTCATCGACCAGTCCCAGTCGCTGAACAT 89513 Query 55831 CTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCG-ATGCACTTTTACGGGTGGAAGA 55889 |||| | ||||| ||| |||| | | || | |||||||| ||| |||||| Sbjct 89514 ACACATGCGTGAGCCTTCTATGGGCAAGATCA-CTAGCATGCACTTCACCGGTTGGAAGC 89572 Query 55890 AGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923 ||| |||||||| || |||||||| || || || Sbjct 89573 TGGGTCTCAAGACTGGCATGTACTACCTCCGCAC 89606 >seq90 Length=145596 Score = 179 bits (198), Expect = 4e-40 Identities = 207/279 (74%), Gaps = 0/279 (0%) Strand=Plus/Plus Query 117299 AGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCG 117358 || || || || ||||| |||| ||| |||||||| | ||||| || ||||| | |||| Sbjct 68090 AGACGGGTAAAGATGTATCGAGCGCTGGCAGCATCGCTACCACCGGCGAGACGAGAACCG 68149 Query 117359 AATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAG 117418 || | || || |||||||||| ||| | |||||| | ||||||||||| || |||| | Sbjct 68150 AAATTGCCGCTGGGCTCCAAGATGTTGACGTTGTTCGAACCCACAAAGTTCTGTGCCAGG 68209 Query 117419 TTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACG 117478 || || || ||| || |||||||| |||||||| || ||||| || | ||| Sbjct 68210 CCGATGATGGTCTGTTGCAGTGAGGCCTCACCGTGGTGATAAGCAGTCTGTTCAGAGACG 68269 Query 117479 TAGCCCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAA 117538 ||||| ||||| | |||||||| |||| || |||||| ||||| ||| || | Sbjct 68270 TAGCCAGCCAGTTCGACCACCTTCTTGTCCTTGGTTAGGTTCCGCTTGAAGCAAGCGAAC 68329 Query 117539 ATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACG 117577 | ||||||||||| | ||||||||||||||| ||||| Sbjct 68330 ACAACCTTGCGCTGGCCAGGCTTCAGACCATCCACCACG 68368 Score = 149 bits (164), Expect = 7e-31 Identities = 299/441 (68%), Gaps = 2/441 (0%) Strand=Plus/Plus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 ||||| ||||| || || || |||||| || | ||| || | | |||||||| | | Sbjct 67943 CCGGTTCCGATACCATCAGCGCCGTTGCAGAGGACCATTGGGAGGACTGGGGCGTACA-C 68001 Query 151936 TC-CGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGG 151994 || |||||| | || | || || || | | | || | ||| | | |||| | Sbjct 68002 TCTCGGCTCAATTTGCTTGCCATCCTCGAACTGGGCTTCGAGAACTGGCTCGTCAAGAGC 68061 Query 151995 ATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCGC 152054 | ||| | ||| || | | ||| || ||| || ||||||||||| | |||||| || Sbjct 68062 AGAGAACACCCGCCGGGCGAAGGGAGACAGACGGGTAAAGATGTATCGAGCGCTGGCAGC 68121 Query 152055 ATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTT 152114 ||| | ||||| || || || | || || | || |||||| | || ||||| ||| Sbjct 68122 ATCGCTACCACCGGCGAGACGAGAACCGAAATTGCCGCTGGGCTCCAAGATGTTGACGTT 68181 Query 152115 GTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACC 152174 ||| | ||||| || ||||| |||| | || || ||||| || ||||| Sbjct 68182 GTTCGAACCCACAAAGTTCTGTGCCAGGCCGATGATGGTCTGTTGCAGTGAGGCCTCACC 68241 Query 152175 GTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCGT 152234 ||||||||| || ||||| || | || ||| || |||| | |||||||| ||||| | Sbjct 68242 GTGGTGATAAGCAGTCTGTTCAGAGACGTAGCCAGCCAGTTCGACCACCTTCTTGTCCTT 68301 Query 152235 CGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCGTC 152294 || |||||| ||||| || ||| | | |||||||||||| || |||| ||| || Sbjct 68302 GGTTAGGTTCCGCTTGAAGCAAGCGAACACAACCTTGCGCTGGCCAGGCTTCAGACCATC 68361 Query 152295 CACCACGTGAGGAATCGAACG 152315 ||||||| ||||| || || Sbjct 68362 CACCACGGACGGAATGGATCG 68382 >seq86 Length=153077 Score = 129 bits (142), Expect = 6e-25 Identities = 306/454 (67%), Gaps = 20/454 (4%) Strand=Plus/Minus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 || ||||| || ||||| || || |||||||||||||| | | |||||||||||||| Sbjct 136663 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTCCCGCCAAGGGAGATGTTCTCCATG 136604 Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTC----CCCAAACTGTGCCATGAG 74578 ||||||||||||| | | ||| || |||||| || | | | | | ||| Sbjct 136603 AAGTCGAAAGGGTTAGTAGACTTGTAGAT---CTTCTCGTTGCCGAGAGCGA-CGAGGAG 136548 Query 74579 GCGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTT 74638 || || || || |||| ||||||||| |||| |||| |||||||| || Sbjct 136547 ACGGTCGGCGACGAATTCGATGTACTGCTTCATCAAGTTGGCATTCATGCCGAGCAGGGC 136488 Query 74639 GCACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACAATCTT 74698 ||||||| |||||||| | ||||| |||| | | |||| ||| || ||| | Sbjct 136487 ACACGGCAAGGCCTCGGTCAGGAACTCCTTCTCAA--TGGCAACAGCATCGGT-AATGAT 136431 Query 74699 G---TGAATGT-CT--TTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGCGTCACGGC 74752 | | | | || ||| |||| || | ||||||| ||| | ||| ||| Sbjct 136430 GGCTTCCACGCGCTGCTTGCTGGGGCGGTTGT---TCAGGTGTGAGAACAGCAAGCAGGC 136374 Query 74753 AAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGG 74812 || || ||| || || || | || | ||| || || || | |||||||| Sbjct 136373 GAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGTTCGTTGGAGAAGGTCAGGCCAGG 136314 Query 74813 CATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCC 74872 ||| || ||||||||||||| ||| ||||||| | ||| | ||||||||||| || || Sbjct 136313 CATCAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAAGCGCCACTGAAGAAAATACC 136254 Query 74873 TTCGACACACGCAAAGGCGACAAGGCGTTGCGCG 74906 ||||||| ||||| || |||||||| || ||| Sbjct 136253 TTCGACAGCAGCAAATGCAACAAGGCGCTGAGCG 136220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547209474449200