Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq121 158 1e-33
>seq121
Length=115632
Score = 158 bits (174), Expect = 1e-33
Identities = 217/302 (72%), Gaps = 6/302 (2%)
Strand=Plus/Minus
Query 30061 CACGTAAAACTG---ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30117
|||||| ||||| | ||||| |||||||| || || ||||||| || ||| ||
Sbjct 106186 CACGTAGAACTGCGCAAACATG---TGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTT 106130
Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 30177
||||||||| |||| || |||||| |||| ||| | ||||| ||| || || |||
Sbjct 106129 GGGGTTCCACGCGCTCAGGATGATCCGCCGGTCGTACGGGTTCGTCCGGAGCTTGTGCAC 106070
Query 30178 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTC 30237
| | | |||||| || || ||| || | |||||| || | | ||| ||||||
Sbjct 106069 GACCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTACTC 106010
Query 30238 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30297
|| ||||| |||| |||||||||||||||||| || || ||||| ||||| || | |||
Sbjct 106009 GGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCGTCGCGGTG 105950
Query 30298 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30357
| | | |||| |||||| || | | || |||||| ||||||| ||||| || ||
Sbjct 105949 CGCCAGGCCCACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAAATCTTGACGCC 105890
Query 30358 CT 30359
||
Sbjct 105889 CT 105888
Score = 132 bits (146), Expect = 4e-26
Identities = 146/192 (76%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 29852 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCT 29911
||||||| ||| ||||| ||| |||||| ||||||| |||| ||||||||| |||||
Sbjct 106488 GGCTCCCGCTCCAGCTGCGTCCTCAGCGCGTCCACGTGGTCCACGTAGACGTGCGCGTCG 106429
Query 29912 CCCAGGTTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29970
|||| | ||| | || || ||||| | || || ||||| || ||||||| |||
Sbjct 106428 CCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCGCACACGTGCGCGATCATGTGCGT 106370
Query 29971 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG 30030
|| || | ||||||||||||||| || || || ||||| |||||||| | |||| |||
Sbjct 106369 CAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATGTCGCAGGACCGCTG 106310
Query 30031 GTAGAGCTGACA 30042
||| ||||| ||
Sbjct 106309 GTACAGCTGGCA 106298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406305675879768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |