Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq121 123 2e-23
>seq121
Length=115632
Score = 123 bits (136), Expect = 2e-23
Identities = 271/398 (68%), Gaps = 6/398 (2%)
Strand=Plus/Plus
Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282
|||||||| ||||| || || |||| | || ||| | | ||||| || ||||||
Sbjct 105791 CCGCTGCTCACGACCAAGCGCGTGTTCCACCGGGCGGTGCTGGCCGAGCTCCTCTGGTTC 105850
Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCT 34342
||| ||| || ||| | | |||| | | ||| || ||||| |||||||
Sbjct 105851 GTGTCGGGCGCGACGTCGTCGCTGCCGCTCAGCGCGCAGGGCGTCAAGATTTGGGACGGC 105910
Query 34343 CACGGGTCTCGAGACTTTCTGGACAAGCGGGGGT-TCCCATCTCGGGAGGAGGGCGACTT 34401
|||| || || | || ||||||| ||| ||| | | || || ||||||||| |
Sbjct 105911 AACGGCTCGCGCGCGTTCCTGGACA-GCGTGGGCCTGGCGCACCGCGACGAGGGCGACCT 105969
Query 34402 GGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCG-AAG 34460
||||| || ||||||||||||||| | ||||| || || ||||| || | ||| |
Sbjct 105970 CGGCCCCGTGTACGGGTTCCAGTGGCGGCACTTCGGCGCCGAGTA-CGTCGACGCGCGCG 106028
Query 34461 CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGA 34520
||||||| | || ||||| | ||||||||| | | || | ||| | | ||
Sbjct 106029 CGGACTACGCCGGCCAGGGCGTCGACCAGCTGGCGGAGGTCGTGCACAAGCTCCGGACGA 106088
Query 34521 ACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGG 34580
|||| | ||| | ||||| | || ||||||||||||| ||||| || | ||||
Sbjct 106089 ACCCGTACGACCGGCGGATCATCCTGAGCGCGTGGAACCCCAAGGACCTGAAGATCATGG 106148
Query 34581 CGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGT 34617
|||| || |||||||||| | ||| || ||||||||
Sbjct 106149 CGCTGCCGCCGTGCCACA-TGTTTGCGCAGTTCTACGT 106185
Score = 123 bits (136), Expect = 2e-23
Identities = 271/398 (68%), Gaps = 6/398 (2%)
Strand=Plus/Minus
Query 6728 ACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786
|||||||| || ||| | |||||||||| || |||||||| | || ||||| ||
Sbjct 106185 ACGTAGAACTGCGCAAACA-TGTGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTTGGG 106127
Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846
||||||||||| || | ||||| | ||| | |||||| | | ||| | ||
Sbjct 106126 GTTCCACGCGCTCAGGATGATCCGCCGGTCGTACGGGTTCGTCCGGAGCTTGTGCACGAC 106067
Query 6847 GTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTT-CGCTCCCCCGATACTCCG 6905
| | ||||||||| | ||||| || | |||||||| ||| | || ||||| |
Sbjct 106066 CTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACG-TACTCGG 106008
Query 6906 CCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATG 6965
| || ||||| | ||||||||||||||| || ||||| | ||||||||| || || |
Sbjct 106007 CGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCGTCGCGGTGCG 105948
Query 6966 GGA-ACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCC 7024
| ||| ||| ||||||| || | || || |||| ||||||| ||||| || |||
Sbjct 105947 CCAGGCCCACGC-TGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAAATCTTGACGCCC 105889
Query 7025 CGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACC 7084
| | |||| | | ||| || ||| ||||||||| || ||||| | | |
Sbjct 105888 TGCGCGCTGAGCGGCAGCGACGACGTCGCGCCCGACACGAACCAGAGGAGCTCGGCCAGC 105829
Query 7085 ACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122
|| || | |||| || || ||||| ||||||||
Sbjct 105828 ACCGCCCGGTGGAACACGCGCTTGGTCGTGAGCAGCGG 105791
Score = 104 bits (114), Expect = 2e-17
Identities = 163/229 (71%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 34620 CGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGC 34679
|||| || | ||| ||||||||| || || || || | |||||||| | || ||||
Sbjct 106281 CGAAGGGCCACCTGCACTGCCAGCTGTACCAGCGGTCCTGCGACATGGGCCTCGGCGTGC 106340
Query 34680 CGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGG 34739
|||||||||| || || ||||| ||||| ||| |||||||||| || || ||| |
Sbjct 106341 CGTTCAACATCGCCAGCTACGCGCTGCTGACGCACATGATCGCGCACGT-GTGCGACCTC 106399
Query 34740 TTCCTGGGGAG-CTGGTGCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCG 34796
||| ||| || ||| || |||| |||| || ||||| ||||| || ||||| | |
Sbjct 106400 GTCCCGGGCAGCCTGACGC--ACGTCATGGGCGACGCGCACGTCTACGTGGACCACGTGG 106457
Query 34797 AGCGGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCT 34845
| ||| ||| |||||| | || ||||| || |||||| ||||
Sbjct 106458 ACGCGCTGAGGACGCAGCTGGAGCGGGAGCCGCGCGAGTTCCCGGAGCT 106506
Score = 104 bits (114), Expect = 2e-17
Identities = 163/229 (71%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 6500 AGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTC 6559
|||| |||||| || ||||| || | |||||| ||| ||| || | ||||| |
Sbjct 106506 AGCTCCGGGAACTCGCGCGGCTCCCGCTCCAGCTGCGTCCTCAGCGCGTCCACGTGGTCC 106447
Query 6560 AGGTAGATATGCGCATCCCCCA--ACGTATGCACCAG-CTCCCCAGGAACCAACCCCACG 6616
| ||||| ||||| || |||| |||| || ||| || ||| ||| | |||
Sbjct 106446 ACGTAGACGTGCGCGTCGCCCATGACGT--GCGTCAGGCTGCCCGGGACGAGGTCGCAC- 106390
Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676
|| || |||||||||| ||| ||||| ||||| || || |||||||||||||| || |
Sbjct 106389 ACGTGCGCGATCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGG 106330
Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCG 6725
|||||||| | || || || || ||||||||| ||| | || ||||
Sbjct 106329 CCCATGTCGCAGGACCGCTGGTACAGCTGGCAGTGCAGGTGGCCCTTCG 106281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448257054470880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |