Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq42 176 1e-38
seq104 172 1e-37
seq8 134 3e-26
seq50 102 2e-16
>seq42
Length=213763
Score = 176 bits (194), Expect = 1e-38
Identities = 166/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || |||||||| || |||||||| || || | ||||| | || ||
Sbjct 68263 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCC 68204
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| ||||| |||||||| || |||| || |||||||||
Sbjct 68203 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCC 68144
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || ||||||||||| || || ||||| || ||||| |||
Sbjct 68143 TGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTC 68084
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| |||||||| ||||| || || | ||||||
Sbjct 68083 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 68052
>seq104
Length=128129
Score = 172 bits (190), Expect = 1e-37
Identities = 167/215 (78%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || || ||||| || |||||||| || || | ||||| | |||||
Sbjct 59900 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 59959
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || ||||| || ||||| || ||||| ||||| | || |||||||||
Sbjct 59960 TCGAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 60019
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || ||||||||||||||| || ||||| |||||||| |||
Sbjct 60020 TGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTC 60079
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || ||||| ||||| || || | |||||| ||
Sbjct 60080 TTGCCGGTGAGGGTCTTGACGAAGATCTGCATCTT 60114
Score = 170 bits (188), Expect = 4e-37
Identities = 165/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || |||||||| || |||||||| || || | || || | || ||
Sbjct 59672 AGGACAAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCC 59731
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| || || || || || ||||| | || |||||||||
Sbjct 59732 TCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCC 59791
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| |||||||| ||||||||||| || || |||||||| ||||| |||
Sbjct 59792 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTC 59851
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||||||||| || || | ||||||
Sbjct 59852 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 59883
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || || ||||| || || ||||| || || | || |||| || |||
Sbjct 59444 AGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGACAGCGTCCGGCCGTCT 59503
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| ||||||||||| || || ||||| || |||| || ||||||||
Sbjct 59504 TCCAGCTGCTTGCCCGCGAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCT 59563
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| |||||||| ||||| || || || ||| |||||||| |||||||||
Sbjct 59564 TGAATCTTGGCCTTCACGTTGTCGATCGTATCCGATGATTCCACCTCGAGGGTGATCGTC 59623
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || ||||| || || | |||||
Sbjct 59624 TTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 59655
>seq8
Length=406722
Score = 134 bits (148), Expect = 3e-26
Identities = 137/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || | ||| || | ||||| || ||||||||||| ||||||||
Sbjct 173809 TTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 173750
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
| || ||||| || ||||| | || ||||||||||||||||| || ||||| |||
Sbjct 173749 AATCGCTGTTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 173690
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|||||||| || || ||||| || ||||| ||||| ||||| || ||||| || ||
Sbjct 173689 ATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAA 173631
>seq50
Length=202051
Score = 102 bits (112), Expect = 2e-16
Identities = 189/276 (68%), Gaps = 6/276 (2%)
Strand=Plus/Minus
Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTCTGCAAATGGC---ATCTTTGTACGCAATGAAGGGC 178144
|||| |||||| ||||||||||| | | |||| ||| |||||| ||||||||
Sbjct 88640 CCAAGGTTCTTCTGGTTGCTCTTGCGGT---TGGCGTGATCCTTGTACAACATGAAGGGG 88584
Query 178145 ATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTC 178204
| || ||| | ||||||| |||| ||| || ||| |||| ||| || | |||
Sbjct 88583 TTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGCTTCTGCGCCTTCAGGGTC 88524
Query 178205 TTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAG 178264
|||| | | || || ||||||||| | ||| || ||||||| ||| || |||
Sbjct 88523 TTTTGGCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAG 88464
Query 178265 ACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTC 178324
|| | || ||||| ||| |||||||| | ||| |||| | |||| | ||
Sbjct 88463 CAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCT 88404
Query 178325 ACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCA 178360
|| || ||||||||||| || | | |||||| ||||
Sbjct 88403 ACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCA 88368
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159137831540210
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |