Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq121 141 8e-29 >seq121 Length=115632 Score = 141 bits (156), Expect = 8e-29 Identities = 148/192 (77%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 29624 GGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCT 29683 ||||||| ||| ||||| ||||||||| ||||||||||| | ||||||||| || || Sbjct 106488 GGCTCCCGCTCCAGCTGCGTCCTCAGCGCGTCCACGTGGTCCACGTAGACGTGCGCGTCG 106429 Query 29684 CCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29742 |||| | ||| | || || ||||| | || || ||||| || ||||||| ||| Sbjct 106428 CCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCGCACACGTGCGCGATCATGTGCGT 106370 Query 29743 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTG 29802 || || | ||||||||||||||| || ||||| ||||| |||||||| | |||| ||| Sbjct 106369 CAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATGTCGCAGGACCGCTG 106310 Query 29803 GTAGAGCTGGCA 29814 ||| |||||||| Sbjct 106309 GTACAGCTGGCA 106298 Score = 109 bits (120), Expect = 4e-19 Identities = 208/313 (66%), Gaps = 6/313 (2%) Strand=Plus/Minus Query 29833 CACGTAAAACTG---ACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTT 29889 |||||| ||||| | ||||| |||||||| || || ||||||| || ||| || Sbjct 106186 CACGTAGAACTGCGCAAACATG---TGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTT 106130 Query 29890 GGGGTTCCAGGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 29949 ||||||||| || | || |||||| |||| ||| | ||||| ||| || || ||| Sbjct 106129 GGGGTTCCACGCGCTCAGGATGATCCGCCGGTCGTACGGGTTCGTCCGGAGCTTGTGCAC 106070 Query 29950 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGNNNNNNNNNNNNNNNNNNN 30009 | | | |||||| || || ||| || | |||||| | Sbjct 106069 GACCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTACTC 106010 Query 30010 NNNNNCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30069 |||| |||| |||||||||||||||||| || || ||||| ||||| || | ||| Sbjct 106009 GGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCGTCGCGGTG 105950 Query 30070 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30129 | | | |||| |||||| || | | || |||||| ||||||| ||||| || || Sbjct 105949 CGCCAGGCCCACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAAATCTTGACGCC 105890 Query 30130 CTTCTCGGAGAGC 30142 || | || |||| Sbjct 105889 CTGCGCGCTGAGC 105877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406158477591244