Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq121 141 8e-29
>seq121
Length=115632
Score = 141 bits (156), Expect = 8e-29
Identities = 148/192 (77%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 29624 GGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCT 29683
||||||| ||| ||||| ||||||||| ||||||||||| | ||||||||| || ||
Sbjct 106488 GGCTCCCGCTCCAGCTGCGTCCTCAGCGCGTCCACGTGGTCCACGTAGACGTGCGCGTCG 106429
Query 29684 CCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29742
|||| | ||| | || || ||||| | || || ||||| || ||||||| |||
Sbjct 106428 CCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCGCACACGTGCGCGATCATGTGCGT 106370
Query 29743 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTG 29802
|| || | ||||||||||||||| || ||||| ||||| |||||||| | |||| |||
Sbjct 106369 CAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATGTCGCAGGACCGCTG 106310
Query 29803 GTAGAGCTGGCA 29814
||| ||||||||
Sbjct 106309 GTACAGCTGGCA 106298
Score = 109 bits (120), Expect = 4e-19
Identities = 208/313 (66%), Gaps = 6/313 (2%)
Strand=Plus/Minus
Query 29833 CACGTAAAACTG---ACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTT 29889
|||||| ||||| | ||||| |||||||| || || ||||||| || ||| ||
Sbjct 106186 CACGTAGAACTGCGCAAACATG---TGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTT 106130
Query 29890 GGGGTTCCAGGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 29949
||||||||| || | || |||||| |||| ||| | ||||| ||| || || |||
Sbjct 106129 GGGGTTCCACGCGCTCAGGATGATCCGCCGGTCGTACGGGTTCGTCCGGAGCTTGTGCAC 106070
Query 29950 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGNNNNNNNNNNNNNNNNNNN 30009
| | | |||||| || || ||| || | |||||| |
Sbjct 106069 GACCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTACTC 106010
Query 30010 NNNNNCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30069
|||| |||| |||||||||||||||||| || || ||||| ||||| || | |||
Sbjct 106009 GGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCGTCGCGGTG 105950
Query 30070 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30129
| | | |||| |||||| || | | || |||||| ||||||| ||||| || ||
Sbjct 105949 CGCCAGGCCCACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAAATCTTGACGCC 105890
Query 30130 CTTCTCGGAGAGC 30142
|| | || ||||
Sbjct 105889 CTGCGCGCTGAGC 105877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406158477591244
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |