Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq121 147 2e-30 >seq121 Length=115632 Score = 147 bits (162), Expect = 2e-30 Identities = 206/289 (71%), Gaps = 0/289 (0%) Strand=Plus/Minus Query 27348 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 27407 ||||||||| || || ||||||| || ||| ||||||||||| |||| || |||||| Sbjct 106165 GTGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTTGGGGTTCCACGCGCTCAGGATGAT 106106 Query 27408 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC 27467 |||| ||| | ||||| ||| || || |||| | | |||||| || || || Sbjct 106105 CCGCCGGTCGTACGGGTTCGTCCGGAGCTTGTGCACGACCTCCGCCAGCTGGTCGACGCC 106046 Query 27468 CATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAA 27527 | || | |||||| | | | ||| |||||| || ||||| |||| ||| ||||| Sbjct 106045 CTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTACTCGGCGCCGAAGTGCCGCCACTGGAA 105986 Query 27528 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAA 27587 ||||||||| || || ||||| ||||| || | |||| | | |||| |||||| || Sbjct 105985 CCCGTACACGGGGCCGAGGTCGCCCTCGTCGCGGTGCGCCAGGCCCACGCTGTCCAGGAA 105926 Query 27588 GTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGC 27636 | | || |||||| ||||||| ||||| || |||| | || |||| Sbjct 105925 CGCGCGCGAGCCGTTGCCGTCCCAAATCTTGACGCCCTGCGCGCTGAGC 105877 Score = 136 bits (150), Expect = 3e-27 Identities = 147/192 (77%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 27118 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCT 27177 ||||||| ||| ||||| ||| |||||| |||||||| |||| ||||||||| ||||| Sbjct 106488 GGCTCCCGCTCCAGCTGCGTCCTCAGCGCGTCCACGTGGTCCACGTAGACGTGCGCGTCG 106429 Query 27178 CCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 27236 |||| | ||| | || || ||||| | || || ||||| || ||||||| ||| Sbjct 106428 CCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCGCACACGTGCGCGATCATGTGCGT 106370 Query 27237 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG 27296 || || | ||||||||||||||| || || || ||||| |||||||| | |||| ||| Sbjct 106369 CAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATGTCGCAGGACCGCTG 106310 Query 27297 GTAGAGCTGACA 27308 ||| ||||| || Sbjct 106309 GTACAGCTGGCA 106298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369502903785974