Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq50 179 5e-40 >seq50 Length=202051 Score = 179 bits (198), Expect = 5e-40 Identities = 395/589 (67%), Gaps = 10/589 (2%) Strand=Plus/Minus Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATA 76609 || || || || || || ||||||| | ||| || || | | || || || ||||| Sbjct 88451 CCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCTACACGCTTCATG 88392 Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669 |||||||| || ||||| || |||| || || || || | | ||||| ||||| Sbjct 88391 AAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCG 88332 Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729 ||||| || || |||||||| | | ||||| |||||||| || || || || Sbjct 88331 TGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATG 88272 Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789 || | | |||| || || ||||| || |||||||| | |||| ||||||||| || | Sbjct 88271 GCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAG 88212 Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCA 76849 || | |||||| || || ||||| || || || || || || |||| || || || Sbjct 88211 ACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAGCCG 88152 Query 76850 CATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 76909 ||||| || | ||||| || ||||| ||||| || ||||| | ||| Sbjct 88151 GTGGCACGGATGCGGTGGACGTTGAGGCCAATGCCTCCAGCCATCTTGGAGATCATGGCA 88092 Query 76910 CAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAA 76969 ||| |||| || |||||||||||||| || || || ||| |||||| || || || Sbjct 88091 CAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGGAAG 88032 Query 76970 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTG 77029 || |||| || ||| || || ||||| |||| || || || || || ||| Sbjct 88031 CACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGTGTG 87972 Query 77030 AACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAACTGCTTCTATAT----CCCATT 77084 || | || | || | |||| ||||| || |||| ||| || || | ||| Sbjct 87971 AAGAACTTGTTGGACATGTAG-TTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCCCCCA 87913 Query 77085 GATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTAC 77133 |||| || |||||||||||||||| ||| ||||| || || || || Sbjct 87912 GATG----CCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCTCGAC 87868 Score = 84.2 bits (92), Expect = 3e-11 Identities = 160/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 ||||||||||| || | | |||| | ||| || || |||||||| ||||| || ||| Sbjct 89636 GTGAACTGAATCGGCGCTGCCGCTGCCTGTGTGCGGAGGTAGTACATGCCAGTCTTGAGA 89577 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496 ||||| |||| ||| ||| |||||||| || | ||| | || || || Sbjct 89576 CCCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAAGGCTCACGCATG 89517 Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556 || || |||| |||||| || |||||||| || || | ||| || ||||| | | Sbjct 89516 TGTATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAGCCATCTGCACG 89457 Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGG 75612 |||||| | || | || ||||| | || ||| | | ||||| |||||||| Sbjct 89456 ATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCATCTGG 89401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712925898257280