Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq42 178 3e-39
seq104 176 9e-39
seq8 161 2e-34
seq86 105 1e-17
>seq42
Length=213763
Score = 178 bits (196), Expect = 3e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || ||||| || | ||| || || |||||||||||||| |
Sbjct 68279 ACCACCACGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 68220
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||| ||||| || || || || || ||||||| || |||||||| ||
Sbjct 68219 GAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGG 68160
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||||||| |||||||| || || || | ||||| ||||| |||| || ||
Sbjct 68159 AATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCAC 68100
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| ||||| | ||||| ||||| ||||||||
Sbjct 68099 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 68052
>seq104
Length=128129
Score = 176 bits (194), Expect = 9e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||||||||| || || |||| || | ||| || || || |||||||||||||
Sbjct 59429 CCACCACGCAGACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGAC 59488
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
||||| ||||| || || || || || || || ||||| | ||| || ||||| |||
Sbjct 59489 AGCGTCCGGCCGTCTTCCAGCTGCTTGCCCGCGAAGATAAGACGCTGCTGGTCTGGGGGA 59548
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
||||||||||||||||| ||||| || || ||| | ||||| || ||||| | ||| ||
Sbjct 59549 ATACCCTCCTTGTCTTGAATCTTGGCCTTCACGTTGTCGATCGTATCCGATGATTCCACC 59608
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||||||||| ||||||| ||||| ||||| || |||||
Sbjct 59609 TCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 59655
Score = 163 bits (180), Expect = 6e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || || || || | |||| || || |||||||||||||| |
Sbjct 59656 ACCACCGCGGAGACGGAGGACAAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGA 59715
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| ||||| || || || ||||| ||||| | ||| || || || ||
Sbjct 59716 CAGAGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGG 59775
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||| |||||||| || || ||| | ||||| ||||| || | || ||
Sbjct 59776 GATACCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGACGACTCCAC 59835
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || || | |||||| ||||| ||||||||
Sbjct 59836 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 59883
Score = 156 bits (172), Expect = 9e-33
Identities = 173/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| |||||||| || || || || || | ||| || || |||||||||||||| |
Sbjct 59884 ACCGCCACGCAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 59943
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || || || || || || |||| || || ||||| ||
Sbjct 59944 GAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGG 60003
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| || || || | ||||| ||||| || | |||||
Sbjct 60004 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCGAC 60063
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| |||||||| ||||| || || | ||||| ||||| |||||||| ||
Sbjct 60064 CTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATCTT 60114
>seq8
Length=406722
Score = 161 bits (178), Expect = 2e-34
Identities = 143/179 (80%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| | ||| |||||||||||||| || || || ||||| ||||||
Sbjct 173809 TTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 173750
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
|| || ||||| || || |||||||||||||| |||||||| || || ||| | |||
Sbjct 173749 AATCGCTGTTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 173690
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| |||| || || || || ||||| ||||| ||||||| ||||| |||||
Sbjct 173689 ATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAA 173631
>seq86
Length=153077
Score = 105 bits (116), Expect = 1e-17
Identities = 163/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 230178 GTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAAT 230237
||||| | ||| ||||||||| | ||| || | || || || |||||||||||
Sbjct 136446 GTTGCCATTGAGAAGGAGTTCCTGACCGAGGCCTTGCCGTGTGCCCTGCTCGGCATGAAT 136505
Query 230238 GCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGG 230297
|| | | ||| ||| || ||||||||||| || || ||| | |||| || || ||
Sbjct 136506 GCCAACTTGATGAAGCAGTACATCGAATTCGTCGCCGACCGTCTCCTCGTCGCTCTCGGC 136565
Query 230298 TACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAG 230357
||||||| | || || || | ||||| |||| || |||||| ||| || ||
Sbjct 136566 AACGAGAAGATCTACAAGTCTACTAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGC 136625
Query 230358 GGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410
||||| || ||||||||||| |||||||| | || || || | | | |||||
Sbjct 136626 GGGAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCTGGTGT 136678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046726405575916
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |