Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq1883 96.9 3e-15 >seq1883 Length=75506 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| |||| || |||||||||| || || ||| ||| |||| | | Sbjct 35404 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCATCG 35345 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || ||| | | | | | ||| || ||| || || || ||| | ||| ||| || Sbjct 35344 GACACGATCGACAACGTGAAGGCCAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAG 35285 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || | ||||||||||||||||| || |||||||| | || || | || ||||| Sbjct 35284 CAGCGTCTTATCTTTGCGGGCAAGCAGCTGGAAGACGGCCGGACGCTGTCTGACTACAAC 35225 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 ||||||||||| || || || ||| ||||| | || | || || ||| Sbjct 35224 ATTCAGAAGGAGTCGACGCTGCACTTGGTGCTGCGTCTGCGTGGTGGG 35177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428322562831970