Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq229 167 3e-36 >seq229 Length=27093 Score = 167 bits (184), Expect = 3e-36 Identities = 279/401 (70%), Gaps = 2/401 (0%) Strand=Plus/Minus Query 145869 CACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCG 145927 |||||||||||| ||| | | |||||| |||||||| |||||| ||||||| | Sbjct 20126 CACGTAGAACTGCGCAAAC-ATGTGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTTGG 20068 Query 145928 GGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCA 145987 ||||||| ||| | |||| || || || | | |||||| || | || | | Sbjct 20067 GGTTCCACGCGCTCAGGATGATCCGCCGGTCGTACGGGTTCGTCCGCAGCTTGTGCACGA 20008 Query 145988 GGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGG 146047 ||| |||||||| |||||||| || ||| || | | ||| |||||| ||| Sbjct 20007 CCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTACTCGG 19948 Query 146048 CCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCC 146107 | |||||||||| ||||||||||||||| ||||| || ||||| || ||| | |||| Sbjct 19947 CGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGGTGCG 19888 Query 146108 CCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCC 146167 |||| || | | | | ||||| | || || |||||| |||||||||||||||||||| Sbjct 19887 CCAGGCCCACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCCT 19828 Query 146168 TCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGA 146227 |||| |||| || ||| | ||| | ||||||||| ||||| | || | Sbjct 19827 GCGCGCTGAGCGGCAGCGACGACGTCGCGCCCGACACGAACCAGAGGAGCTCGGCCAGCA 19768 Query 146228 CCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAAC 146268 || ||| ||| || | ||| || || ||||| ||| || Sbjct 19767 CCGCCCGGTGGAACACGCGCTTCGTCGTGAGCAGCGGGTAC 19727 Score = 141 bits (156), Expect = 1e-28 Identities = 233/327 (71%), Gaps = 27/327 (8%) Strand=Plus/Minus Query 145540 ACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCC 145599 |||| ||||| ||||| ||| | | ||| |||| ||| || | || ||||||||||| Sbjct 20542 ACCGACATCTTCATGGCGATCGTCTTGTGCGGGTCGTACCCTTTCACGACAAAGTCCTCC 20483 Query 145600 ---GCCCTGAAGTCATCTATGT------CCTCCACCCGCCTCAGGATCCTGAGC-CTGGG 145649 |||| | |||| ||| ||| | |||||| ||||| ||| | ||| Sbjct 20482 AGCGCCC---ACCCATCGATGCTGCCGCCCTTCTCCCGCC---GGATCTCCAGCTCCGGG 20429 Query 145650 AAAGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGC---TCCACGTGGTTGAGGT 145705 || || | |||||| | || ||||| | || || || |||||||||| | || Sbjct 20428 AACTCGC--GCGGCTCCCGCTCCAGCTG---CGTCCGGAGCGCGTCCACGTGGTCCACGT 20374 Query 145706 AGACGTGCGCGTCCCCCAGGACGTGGATGAAG-TCCCCGGGCTCGAGGCCCGTGAGGTGG 145764 ||||||||||||| |||| |||||| | | | | |||||| ||||| | | ||| Sbjct 20373 AGACGTGCGCGTCGCCCATGACGTGCGTCAGGCTGCCCGGGA-CGAGGTCACACACGTGC 20315 Query 145765 GCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATG 145824 |||| ||||| |||||||| | ||||||||| |||||||| ||||| || || ||||| Sbjct 20314 GCGATCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATA 20255 Query 145825 TCCCCCGAGCGCTGGTACAGCTGGCAG 145851 || | || |||||||||||||||||| Sbjct 20254 TCGCAGGACCGCTGGTACAGCTGGCAG 20228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590057814278960