Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq1610 181 1e-40
seq1883 149 6e-31
seq5 143 3e-29
seq9 105 7e-18
>seq1610
Length=70883
Score = 181 bits (200), Expect = 1e-40
Identities = 318/457 (70%), Gaps = 7/457 (2%)
Strand=Plus/Plus
Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041
|||||||||| ||||| ||| | |||||| | | | ||| | ||| || ||||||
Sbjct 61973 AGAAGGCCGACTGGGCTCTGAGGTGGATCCAGGACCGTGAGTCTACCTACGCTCAGCGCC 62032
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
| || || || || || ||||| || | ||||| ||| |||||| |||| || |
Sbjct 62033 TTGTTGCATTTGCTGCTGTCGAAGGTATTTTCTTCAGTGGCGCTTTCGCTTCCATCTTCT 62092
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|||| ||||| || || || ||||| |||||||| ||| |||||| |||||||| | |
Sbjct 62093 GGCTGAAGAAGCGTGGTCTGATGCCTGGCCTGACCTTCTCCAACGAACTCATCTCTCGTG 62152
Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221
||||||||||||| ||||| ||||| ||||||||| || || | || || |
Sbjct 62153 ACGAGGGTCTGCACACTGACTTCGCCTGCTTGCTGTTCTCACACCTGAACAACCGCCCCA 62212
Query 117222 GCGCGGCGCGCGTCAGGGAG--ATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCT 117279
|| | |||||| || || ||| | ||||| || || ||||| ||| || |||||
Sbjct 62213 GCAAGCAGCGCGT--GGAAGCCATCATTACCGATGCTGTTGCCATTGAGAAGGAGTTCCT 62270
Query 117280 CACCGAAGCGCTG-CCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACA 117338
||||| || || || |||| || || || | ||| | | |||| ||| ||||
Sbjct 62271 GACCGAGGCCTTGCCCTGTGC-CCTACTCGGCATGAATGCCAACTTGATGAAGCAGTACA 62329
Query 117339 TCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGC 117398
|||| |||||||||||| | || || ||| || | | || ||| |||||| |
Sbjct 62330 TCGAATTCGTCGCCGACCGTCTCCTCGTCGCTCTCGGCAACGAGAAGATCTACAAGTCTA 62389
Query 117399 CCAACCCGCTGGACTTTATGAACCTCATCT-CCTTGG 117434
| ||||| | ||||| ||| | ||||| ||||||
Sbjct 62390 CTAACCCTTTCGACTTCATGGAGAACATCTCCCTTGG 62426
Score = 150 bits (166), Expect = 2e-31
Identities = 188/257 (73%), Gaps = 3/257 (1%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||| ||||||||| |||||||||| |||||| | ||||||
Sbjct 61567 ATTTGGCAAATGTACAAGAAGCACGAGGCGTCCTTCTGGACCGCTGAGGAGATTGACCTG 61626
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|| |||||| | ||||||| | || |||| ||| ||||| | ||||||
Sbjct 61627 TCTAAGGACCTGCACGACTGGAACAACCGTTTGACCGATGACGAGAAATACTTCATCTCC 61686
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||| | || ||||| || ||||| ||||||||||| ||||| || || |||||||
Sbjct 61687 CACATCCTCGCCTTCTTTGCCGCTTCGGACGGCATCGTTAACGAAAACTTGATCGAGCGC 61746
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| | ||||| ||| | | ||||| || || ||||||||||| |||| | |||
Sbjct 61747 TTCAGTGCTGAGGTCCAGATTCCTGAGGCCCGTTGTTTCTACGGCTTCCAGACCATGATG 61806
Query 116873 GAGAACGTGCACTCGGA 116889
|||||| | ||||| ||
Sbjct 61807 GAGAACATCCACTCCGA 61823
>seq1883
Length=75506
Score = 149 bits (164), Expect = 6e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || ||||| ||||| |||||||| | || ||||| ||
Sbjct 35863 AAGATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCC 35804
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | | |||||| || || | ||||| ||||||||||| |||||
Sbjct 35803 TCTGACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGAC 35744
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || || || | ||| ||||| ||||| || || | ||||||||| |||||||
Sbjct 35743 CAGCAGCGCCTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTAC 35684
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||||||||||| | ||||| || || || | || || | |||||
Sbjct 35683 AACATCCAGAAGGAGTCGACGCTCCACCTCGTCCTCCGTCTGCGTGGCGG 35634
Score = 141 bits (156), Expect = 1e-28
Identities = 159/210 (76%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||| || |||||| |||| || || | ||
Sbjct 35632 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACGATCACCCTCGAGGTGGAGTCGTCC 35573
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | |||| || || | ||||| ||||| ||||| |||| ||
Sbjct 35572 GACACCATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCA 35514
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| ||| || || ||||| || |||| ||||| || |||||||||
Sbjct 35513 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACTCTGTCCGACTACAA 35454
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||||| ||||||| || || ||
Sbjct 35453 CATCCAGAAGGAGTCCACGCTCCACCTTGT 35424
Score = 140 bits (154), Expect = 3e-28
Identities = 162/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || |||||||| || |||||| |||| || ||| | |
Sbjct 35404 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCATCG 35345
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | |||| || |||| ||||| ||||| || ||| | |||||
Sbjct 35344 GACACGATCGACAACG-TGAAGGCCAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCA 35286
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| |||||||| |||||||| |||| || || || ||||||||
Sbjct 35285 GCAGCGTCTTATCTTTGCGGGCAAGCAGCTGGAAGACGGCCGGACGCTGTCTGACTACAA 35226
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||| ||||||||| | |||||||| | ||| ||||
Sbjct 35225 CATTCAGAAGGAGTCGACGCTGCACTTGGTGCTGCG 35190
>seq5
Length=272196
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||||||||| || |||||| | || || || | ||
Sbjct 174361 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCC 174302
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| || || | ||||| ||||| || ||| | |||||
Sbjct 174301 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAA 174242
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| ||| ||||| ||||| || |||| || |||||| |||||| |||
Sbjct 174241 CAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTATAAC 174182
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||||||| |||| ||||| || || ||||| || | || ||
Sbjct 174181 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGCCTGCGTGGTGG 174135
>seq9
Length=228969
Score = 105 bits (116), Expect = 7e-18
Identities = 134/182 (74%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || ||||| || || |||||| | || || || | |||||| | |
Sbjct 118475 TTCGTGAAGACTCTGACGGGTAAGACTATCACCCTTGAGGTGGAGTCTTCCGACACCATC 118416
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| |||||| || || | ||||| ||||| ||||| |||| || || ||| |
Sbjct 118415 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCAACAGCGATT 118357
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| ||||| ||||| || || | ||||| || ||||||||||||||||||
Sbjct 118356 GATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAA 118297
Query 40878 GG 40879
||
Sbjct 118296 GG 118295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515202622822240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |