Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq2567 118 2e-21
seq1639 91.5 3e-13
>seq2567
Length=106708
Score = 118 bits (130), Expect = 2e-21
Identities = 271/403 (67%), Gaps = 30/403 (7%)
Strand=Plus/Minus
Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060
|| |||||| |||| ||| |||| || || || || |||||||| || || ||||| ||
Sbjct 59769 CTGCCTCATATGCTCTTCTACGGCCCACCTGGGACCGGCAAGACCTCTACGATCCTCGCC 59710
Query 254061 CTGGCCC--GAACCCTGTTGGGCGAGGGGAA--CATGAGAGAGCGCGTGCTCGAGCTGAA 254116
|| ||| || | || || | ||| ||||| ||||||| |||||||||||
Sbjct 59709 CTCGCCAAGGAGCTCTACGGGCCC----GAATTCATGAAGCAGCGCGTCCTCGAGCTGAA 59654
Query 254117 CGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAG-ACTTT-CTC-CA- 254172
|||||| ||||| ||||| | | | ||||| || || ||||| ||||| | | ||
Sbjct 59653 CGCTTCGGACGAGCGCGGCATCTCCATTGTCCGAGAGAAAGTCAAGGACTTTGCGCGCAT 59594
Query 254173 --AGATGTCGATTTCGTCGTTC--------------CAACCCGGCTGTCCGCCTTTCAAG 254216
|| || ||| | | || | | |||| ||| ||||| |||||
Sbjct 59593 GCAGCTGACGAGTCCCCCGCCCGGCTATAAGGACCGCTACCC--CTGCCCGCCCTTCAAA 59536
Query 254217 CTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGA 254276
|| | || || |||||||| || | |||||| || |||||| || || ||||||
Sbjct 59535 ATCATCATTCTAGACGAGGCCGATAGCATGACACAGGATGCGCAGAGTGCGCTGCGCCGA 59476
Query 254277 ACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAG 254336
||||||||||| || | | ||||| || || ||| | ||||||||||| ||
Sbjct 59475 ACGATGGAGACATACAGCAAGATCACGCGATTCTGTCTGATTTGCAACTACGTCACGCGC 59416
Query 254337 ATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
||||| | |||||||| | ||| |||||| |||||||
Sbjct 59415 ATCATTGATCCGCTGGCGAGCAGATGCAGCAAGTTCCGATTCA 59373
>seq1639
Length=274467
Score = 91.5 bits (100), Expect = 3e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 254017 TCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTGT 254076
|| |||| ||||| || ||||| ||||| || |||||||| || || || || | | |
Sbjct 210572 TCTACGGCCCTCCAGGTACAGGGAAGACTTCCACCATCCTCGCCCTCGCTCGCCGCATCT 210631
Query 254077 TGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGT 254136
|| | | ||||||| | || |||||||||||||| ||||| ||||| || ||
Sbjct 210632 ATGGAGCCGAGAACATGCGCCAGATGGTGCTCGAGCTGAATGCTTCCGACGACCGTGGCA 210691
Query 254137 TGGACGTCGTCCGCGACAAGATCAAGACTTTCTCC 254171
| ||||| || ||||| |||| ||||| ||| ||
Sbjct 210692 TCGACGTAGTGCGCGAACAGATTAAGACGTTCGCC 210726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073730987855232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |