Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq17 333 2e-86
seq1883 113 4e-20
seq1610 111 1e-19
seq5 93.3 4e-14
>seq17
Length=201905
Score = 333 bits (368), Expect = 2e-86
Identities = 1235/1904 (65%), Gaps = 52/1904 (3%)
Strand=Plus/Minus
Query 22105 CTTGTCCACTGTAAACTGTAT-GGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGC 22163
|| ||| ||||| ||||| || |||| | || || | | ||||| || || |||||||
Sbjct 89401 CTGGTCGACTGTGAACTGAATCGGCGCT-GCCGCTGCCTGTGTGCGGAGGTAGTACATGC 89343
Query 22164 CCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCG 22223
| ||||| ||||||| |||||| || || || || || | || || | |
Sbjct 89342 CAGTCTTGAGACCCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAAG 89283
Query 22224 GCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGG 22283
|| ||||| | || | |||||| ||| ||||| || || || |||||||| |
Sbjct 89282 GCTCACGCATGTGTATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAG 89223
Query 22284 CCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343
|||| | | | || | | ||| || ||||| ||||||||||| || | |||| |
Sbjct 89222 CCATCTGCACGATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGT 89163
Query 22344 CTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402
| || || | | ||| | |||||| || || | | ||||| || ||
Sbjct 89162 CATCTGGGAT-GCTGCGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCTTC 89104
Query 22403 ATCGTATCGTTCCACAAACCG-ATGGCGGTCAAATCTTTGACCAG--ATGACGGTTCACC 22459
| || ||||| ||| | || || ||| |||| ||| ||| | || ||
Sbjct 89103 AGGTCCTCAGACCACAGACCACACTGCAC-CAGATCCTTGAGCAGCCATG--GATTGACA 89047
Query 22460 ACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAA 22519
||||| |||||||| | | |||||||| || || ||||||||||| | || || ||
Sbjct 89046 ACTTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAG 88987
Query 22520 GATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGC 22579
| || ||||| ||||| ||||| | ||||| || || ||||| ||||||| || |
Sbjct 88986 CACTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAG 88927
Query 22580 GAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGA--GCATCGACCAGTCCCACAG 22635
||| | | ||||||| |||| | || ||| | || || ||||||||| ||
Sbjct 88926 CTGTTGCGGACACCGTGCTGCTTGA--TCTTGGCCTTCAAGGCGTC--CCAGTCCCAGAG 88871
Query 22636 ATCGGACGGCGTCACATTGTCCCACATATCGTATTGCA--ACACGCCGCGACTCGCCGGG 22693
||| || ||| | ||||||| |||||| ||||| |||| | || | | || || | |
Sbjct 88870 ATCAGAGGGCTTGACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGG-GAG 88812
Query 22694 CTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAAC 22753
| ||| |||| | | ||| || |||| | | ||||| || || || |
Sbjct 88811 ATCCCT-CGTATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGG 88753
Query 22754 GCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACGCT 22809
||| ||| || || ||||||||||| | |||||||| || || || |||
Sbjct 88752 GCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGAC--- 88696
Query 22810 TTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGAT 22869
||| | ||||| || | || ||| || || |||| |||||| ||||| | || ||
Sbjct 88695 -TCGAAAGGCATGCGGAGGGCCAAGAAAGCATCGGCCAGACCCTGGACGCCCACGCCAAT 88637
Query 22870 CGGTCGGTTTTTCAGATTCGACACTTTTG--CCTCGGGCAAAGGATACCAATTCGAATCG 22927
|| |||| || || | ||| | |||| || | |||||| || ||||
Sbjct 88636 AGGACGGTGGCGCATGTTG--CTCTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCG 88579
Query 22928 ATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCG 22987
|| | |||||| ||| | || | | || | | ||||
Sbjct 88578 ATGATCTTGTTCAGGTTGCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGTTA 88519
Query 22988 TAAACGCCCGATT---GTA--CAACAAACTTGTTG-ACGGCGATCGAGGCAAGATTGCAT 23041
|| ||| | ||| ||| | || |||| || | | |||||| || || || |||||
Sbjct 88518 TAG-CGCTC-ATTCTCGTAGTCGACGAACT-GTGGCAGGGCGATAGACGCCAGGTTGCAG 88462
Query 23042 ACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTT 23101
|| || |||||||| | | ||||| | || || || || || ||| |
Sbjct 88461 ACAGCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGA 88402
Query 23102 ATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTAC 23161
|| ||||| | || |||||||||| || || ||| ||||||||| | |||| |
Sbjct 88401 ATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAG 88342
Query 23162 GGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACA 23221
|| |||| |||||| || | ||||| ||| || ||| | |||| || | |
Sbjct 88341 GGGTTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGCTTCTGCGCCTTCAGG 88282
Query 23222 CGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACC 23280
||| | | | || || ||||||||| | ||||| || || || || | ||
Sbjct 88281 -GTCTTTTGGCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCC 88223
Query 23281 GTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATT 23340
||| |||||||| |||||||| | | | || ||||| ||| |||| || ||
Sbjct 88222 GTAGCAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTT 88163
Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400
|| || || |||| || |||||||| ||||| || || ||| || || || || ||
Sbjct 88162 CTCCACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACG 88103
Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460
||||| || || ||| |||||| || || | || || || || || || |||||
Sbjct 88102 GACCTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCA 88043
Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520
||||| ||||| | |||||| || || || | ||||||||| |||||||||||||| ||
Sbjct 88042 TGGCTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCG 87983
Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580
||| ||||||||| | || | | ||| || | || || ||||||| |||| |||
Sbjct 87982 GGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCC 87923
Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640
|| | || || | || || | | ||| |||| || ||| |||||||| ||
Sbjct 87922 AGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCAGCCAT 87863
Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700
|| || ||||| || || ||||| || || ||||||||||| ||||||||||| ||
Sbjct 87862 CTTGGAGATCATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTT 87803
Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760
| | || | ||| ||||| |||| ||||| | ||||| |||| |||||| ||
Sbjct 87802 CATGTCAACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGT 87743
Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACAT-TAGATTGTACGTGTCGATGGCGGCAT 23819
|| ||||| || ||| | || ||||| ||| ||||| || || | | |
Sbjct 87742 TGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAG-TTGTAGGTCTCAAGAACCCTCT 87684
Query 23820 CAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGA 23879
| |||| || || || || | ||||| ||||||| ||||| || || | |||||
Sbjct 87683 CGATGTTGTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCTCGA 87624
Query 23880 C--CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937
| | | | ||||| | ||||| ||||| ||||| | | || || || ||||| ||
Sbjct 87623 CGACTTTA--CCGTTGAGTTTGAGGAGATACGAACGCTCGAGGGTCTTGAAGCCAAAGTA 87566
Query 23938 GTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAAC 23981
| ||| | |||| ||||| | || || || ||| ||||||
Sbjct 87565 TTGATATTGGTAGTCGCGATCATAGACAATAGCAGAA-TCAAAC 87523
>seq1883
Length=75506
Score = 113 bits (124), Expect = 4e-20
Identities = 170/239 (71%), Gaps = 2/239 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| ||||| ||||| ||||| ||||||||| |||| || ||| | ||
Sbjct 35404 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCATCG 35345
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || | || |||||||| || | || || ||||||
Sbjct 35344 GACACGATCGACAACGTGAAGGCCAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAG 35285
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || || ||||| ||| |||||||| ||| || || || |||
Sbjct 35284 CAGCGTCTTATCTTTGCGGGCAAGCAGCTGGAAGACGGCCGGACGCTGTCTGACTACAAC 35225
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAG-GGGCGGTAG-AAGCGGT 31429
||||| || || ||||| || || |||| || | ||| | || || || |||||||
Sbjct 35224 ATTCAGAAGGAGTCGACGCTGCACTTGGTGCTGCGTCTGCGTGGTGGGCAGTAAGCGGT 35166
Score = 98.7 bits (108), Expect = 9e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| |||||||| || ||||| ||||||||| |||| || || |||||
Sbjct 35632 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACGATCACCCTCGAGGTGGAGTCGTCC 35573
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || | || ||||||||| || | || || || |||
Sbjct 35572 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCAG 35513
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||| || || ||| | || ||| ||| || ||| || |||
Sbjct 35512 CAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACTCTGTCCGACTACAAC 35453
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || || || || || || || || || ||
Sbjct 35452 ATCCAGAAGGAGTCCACGCTCCACCTTGTCCT 35421
Score = 86.0 bits (94), Expect = 6e-12
Identities = 158/232 (68%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| || ||||| ||||| || || ||||| || ||||| | || || || |
Sbjct 35863 AAGATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCC 35804
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | || | ||||| | || ||||||||| ||| | || || |||
Sbjct 35803 TCTGACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGAC 35744
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|||||||| || || ||||||||||| ||| | || || || | ||| ||
Sbjct 35743 CAGCAGCGCCTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTAC 35684
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || || || ||||| || || || || || | ||| | |||||||
Sbjct 35683 AACATCCAGAAGGAGTCGACGCTCCACCTCGTCCTCCGTCTGCGTGGCGGTA 35632
>seq1610
Length=70883
Score = 111 bits (122), Expect = 1e-19
Identities = 212/310 (68%), Gaps = 2/310 (1%)
Strand=Plus/Plus
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTT-GCGGCAATATTTTGGAT 58039
|| || || || ||||||||||| ||||| ||| ||||| || | || || ||| |
Sbjct 62038 GCATTTGCTGCTGTCGAAGGTATTTTCTTCAGTGGC-GCTTTCGCTTCCATCTTCTGGCT 62096
Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099
|||||| || || |||||||| |||||||| || |||||| | || || || |||||
Sbjct 62097 GAAGAAGCGTGGTCTGATGCCTGGCCTGACCTTCTCCAACGAACTCATCTCTCGTGACGA 62156
Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCG 58159
|||||| || ||||| || || ||| | ||| ||| ||| | ||| || |
Sbjct 62157 GGGTCTGCACACTGACTTCGCCTGCTTGCTGTTCTCACACCTGAACAACCGCCCCAGCAA 62216
Query 58160 GGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGA 58219
| | ||| | | ||| || ||||| || || || || || || ||||| | |||||
Sbjct 62217 GCAGCGCGTGGAAGCCATCATTACCGATGCTGTTGCCATTGAGAAGGAGTTCCTGACCGA 62276
Query 58220 AGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTT 58279
||| | || ||| | ||||| ||||| | |||||| ||||||| || ||
Sbjct 62277 GGCCTTGCCCTGTGCCCTACTCGGCATGAATGCCAACTTGATGAAGCAGTACATCGAATT 62336
Query 58280 TGTTGCCGAC 58289
|| ||||||
Sbjct 62337 CGTCGCCGAC 62346
>seq5
Length=272196
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| || || ||||| || |||||| | || || || | ||
Sbjct 174362 CATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTC 174303
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||||| |||| | ||||| | || ||||||||| || | || || |||||
Sbjct 174302 CGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCA 174243
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||||| || || ||||||||||| ||| | || ||| || | ||| |||||
Sbjct 174242 ACAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTATAA 174183
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||| || || || || || || || ||||| || | ||| | || |||
Sbjct 174182 CATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGCCTGCGTGGTGGT 174134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445752057466080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |