Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq17 333 2e-86 seq1883 113 4e-20 seq1610 111 1e-19 seq5 93.3 4e-14 >seq17 Length=201905 Score = 333 bits (368), Expect = 2e-86 Identities = 1235/1904 (65%), Gaps = 52/1904 (3%) Strand=Plus/Minus Query 22105 CTTGTCCACTGTAAACTGTAT-GGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGC 22163 || ||| ||||| ||||| || |||| | || || | | ||||| || || ||||||| Sbjct 89401 CTGGTCGACTGTGAACTGAATCGGCGCT-GCCGCTGCCTGTGTGCGGAGGTAGTACATGC 89343 Query 22164 CCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCG 22223 | ||||| ||||||| |||||| || || || || || | || || | | Sbjct 89342 CAGTCTTGAGACCCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAAG 89283 Query 22224 GCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGG 22283 || ||||| | || | |||||| ||| ||||| || || || |||||||| | Sbjct 89282 GCTCACGCATGTGTATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAG 89223 Query 22284 CCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343 |||| | | | || | | ||| || ||||| ||||||||||| || | |||| | Sbjct 89222 CCATCTGCACGATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGT 89163 Query 22344 CTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402 | || || | | ||| | |||||| || || | | ||||| || || Sbjct 89162 CATCTGGGAT-GCTGCGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCTTC 89104 Query 22403 ATCGTATCGTTCCACAAACCG-ATGGCGGTCAAATCTTTGACCAG--ATGACGGTTCACC 22459 | || ||||| ||| | || || ||| |||| ||| ||| | || || Sbjct 89103 AGGTCCTCAGACCACAGACCACACTGCAC-CAGATCCTTGAGCAGCCATG--GATTGACA 89047 Query 22460 ACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAA 22519 ||||| |||||||| | | |||||||| || || ||||||||||| | || || || Sbjct 89046 ACTTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAG 88987 Query 22520 GATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGC 22579 | || ||||| ||||| ||||| | ||||| || || ||||| ||||||| || | Sbjct 88986 CACTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAG 88927 Query 22580 GAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGA--GCATCGACCAGTCCCACAG 22635 ||| | | ||||||| |||| | || ||| | || || ||||||||| || Sbjct 88926 CTGTTGCGGACACCGTGCTGCTTGA--TCTTGGCCTTCAAGGCGTC--CCAGTCCCAGAG 88871 Query 22636 ATCGGACGGCGTCACATTGTCCCACATATCGTATTGCA--ACACGCCGCGACTCGCCGGG 22693 ||| || ||| | ||||||| |||||| ||||| |||| | || | | || || | | Sbjct 88870 ATCAGAGGGCTTGACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGG-GAG 88812 Query 22694 CTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAAC 22753 | ||| |||| | | ||| || |||| | | ||||| || || || | Sbjct 88811 ATCCCT-CGTATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGG 88753 Query 22754 GCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACGCT 22809 ||| ||| || || ||||||||||| | |||||||| || || || ||| Sbjct 88752 GCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGAC--- 88696 Query 22810 TTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGAT 22869 ||| | ||||| || | || ||| || || |||| |||||| ||||| | || || Sbjct 88695 -TCGAAAGGCATGCGGAGGGCCAAGAAAGCATCGGCCAGACCCTGGACGCCCACGCCAAT 88637 Query 22870 CGGTCGGTTTTTCAGATTCGACACTTTTG--CCTCGGGCAAAGGATACCAATTCGAATCG 22927 || |||| || || | ||| | |||| || | |||||| || |||| Sbjct 88636 AGGACGGTGGCGCATGTTG--CTCTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCG 88579 Query 22928 ATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCG 22987 || | |||||| ||| | || | | || | | |||| Sbjct 88578 ATGATCTTGTTCAGGTTGCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGTTA 88519 Query 22988 TAAACGCCCGATT---GTA--CAACAAACTTGTTG-ACGGCGATCGAGGCAAGATTGCAT 23041 || ||| | ||| ||| | || |||| || | | |||||| || || || ||||| Sbjct 88518 TAG-CGCTC-ATTCTCGTAGTCGACGAACT-GTGGCAGGGCGATAGACGCCAGGTTGCAG 88462 Query 23042 ACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTT 23101 || || |||||||| | | ||||| | || || || || || ||| | Sbjct 88461 ACAGCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGA 88402 Query 23102 ATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTAC 23161 || ||||| | || |||||||||| || || ||| ||||||||| | |||| | Sbjct 88401 ATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAG 88342 Query 23162 GGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACA 23221 || |||| |||||| || | ||||| ||| || ||| | |||| || | | Sbjct 88341 GGGTTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGCTTCTGCGCCTTCAGG 88282 Query 23222 CGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACC 23280 ||| | | | || || ||||||||| | ||||| || || || || | || Sbjct 88281 -GTCTTTTGGCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCC 88223 Query 23281 GTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATT 23340 ||| |||||||| |||||||| | | | || ||||| ||| |||| || || Sbjct 88222 GTAGCAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTT 88163 Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400 || || || |||| || |||||||| ||||| || || ||| || || || || || Sbjct 88162 CTCCACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACG 88103 Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460 ||||| || || ||| |||||| || || | || || || || || || ||||| Sbjct 88102 GACCTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCA 88043 Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520 ||||| ||||| | |||||| || || || | ||||||||| |||||||||||||| || Sbjct 88042 TGGCTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCG 87983 Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580 ||| ||||||||| | || | | ||| || | || || ||||||| |||| ||| Sbjct 87982 GGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCC 87923 Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 || | || || | || || | | ||| |||| || ||| |||||||| || Sbjct 87922 AGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCAGCCAT 87863 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 || || ||||| || || ||||| || || ||||||||||| ||||||||||| || Sbjct 87862 CTTGGAGATCATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTT 87803 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | | || | ||| ||||| |||| ||||| | ||||| |||| |||||| || Sbjct 87802 CATGTCAACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGT 87743 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACAT-TAGATTGTACGTGTCGATGGCGGCAT 23819 || ||||| || ||| | || ||||| ||| ||||| || || | | | Sbjct 87742 TGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAG-TTGTAGGTCTCAAGAACCCTCT 87684 Query 23820 CAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGA 23879 | |||| || || || || | ||||| ||||||| ||||| || || | ||||| Sbjct 87683 CGATGTTGTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCTCGA 87624 Query 23880 C--CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937 | | | | ||||| | ||||| ||||| ||||| | | || || || ||||| || Sbjct 87623 CGACTTTA--CCGTTGAGTTTGAGGAGATACGAACGCTCGAGGGTCTTGAAGCCAAAGTA 87566 Query 23938 GTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAAC 23981 | ||| | |||| ||||| | || || || ||| |||||| Sbjct 87565 TTGATATTGGTAGTCGCGATCATAGACAATAGCAGAA-TCAAAC 87523 >seq1883 Length=75506 Score = 113 bits (124), Expect = 4e-20 Identities = 170/239 (71%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| ||||| ||||| ||||||||| |||| || ||| | || Sbjct 35404 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCATCG 35345 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || |||||||| || | || || |||||| Sbjct 35344 GACACGATCGACAACGTGAAGGCCAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAG 35285 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || ||||| ||| |||||||| ||| || || || ||| Sbjct 35284 CAGCGTCTTATCTTTGCGGGCAAGCAGCTGGAAGACGGCCGGACGCTGTCTGACTACAAC 35225 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAG-GGGCGGTAG-AAGCGGT 31429 ||||| || || ||||| || || |||| || | ||| | || || || ||||||| Sbjct 35224 ATTCAGAAGGAGTCGACGCTGCACTTGGTGCTGCGTCTGCGTGGTGGGCAGTAAGCGGT 35166 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || ||||| ||||||||| |||| || || ||||| Sbjct 35632 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACGATCACCCTCGAGGTGGAGTCGTCC 35573 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||||||||| || | || || || ||| Sbjct 35572 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCAG 35513 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| || || ||| | || ||| ||| || ||| || ||| Sbjct 35512 CAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACTCTGTCCGACTACAAC 35453 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || || || || || || || Sbjct 35452 ATCCAGAAGGAGTCCACGCTCCACCTTGTCCT 35421 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| ||||| || || ||||| || ||||| | || || || | Sbjct 35863 AAGATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCC 35804 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| | || | ||||| | || ||||||||| ||| | || || ||| Sbjct 35803 TCTGACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGAC 35744 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||||||||| ||| | || || || | ||| || Sbjct 35743 CAGCAGCGCCTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTAC 35684 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || ||||| || || || || || | ||| | ||||||| Sbjct 35683 AACATCCAGAAGGAGTCGACGCTCCACCTCGTCCTCCGTCTGCGTGGCGGTA 35632 >seq1610 Length=70883 Score = 111 bits (122), Expect = 1e-19 Identities = 212/310 (68%), Gaps = 2/310 (1%) Strand=Plus/Plus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTT-GCGGCAATATTTTGGAT 58039 || || || || ||||||||||| ||||| ||| ||||| || | || || ||| | Sbjct 62038 GCATTTGCTGCTGTCGAAGGTATTTTCTTCAGTGGC-GCTTTCGCTTCCATCTTCTGGCT 62096 Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 |||||| || || |||||||| |||||||| || |||||| | || || || ||||| Sbjct 62097 GAAGAAGCGTGGTCTGATGCCTGGCCTGACCTTCTCCAACGAACTCATCTCTCGTGACGA 62156 Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCG 58159 |||||| || ||||| || || ||| | ||| ||| ||| | ||| || | Sbjct 62157 GGGTCTGCACACTGACTTCGCCTGCTTGCTGTTCTCACACCTGAACAACCGCCCCAGCAA 62216 Query 58160 GGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGA 58219 | | ||| | | ||| || ||||| || || || || || || ||||| | ||||| Sbjct 62217 GCAGCGCGTGGAAGCCATCATTACCGATGCTGTTGCCATTGAGAAGGAGTTCCTGACCGA 62276 Query 58220 AGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTT 58279 ||| | || ||| | ||||| ||||| | |||||| ||||||| || || Sbjct 62277 GGCCTTGCCCTGTGCCCTACTCGGCATGAATGCCAACTTGATGAAGCAGTACATCGAATT 62336 Query 58280 TGTTGCCGAC 58289 || |||||| Sbjct 62337 CGTCGCCGAC 62346 >seq5 Length=272196 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || |||||| | || || || | || Sbjct 174362 CATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTC 174303 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | ||||| | || ||||||||| || | || || ||||| Sbjct 174302 CGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCA 174243 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||| || || ||||||||||| ||| | || ||| || | ||| ||||| Sbjct 174242 ACAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTATAA 174183 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||| || || || || || || || ||||| || | ||| | || ||| Sbjct 174182 CATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGCCTGCGTGGTGGT 174134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445752057466080