Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq17 138 1e-27
seq1610 122 1e-22
>seq17
Length=201905
Score = 138 bits (152), Expect = 1e-27
Identities = 374/567 (66%), Gaps = 14/567 (2%)
Strand=Plus/Minus
Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63293
|| ||||||| | ||| || |||| | || ||| || ||||| |||||||| || |||
Sbjct 88191 GGGCACATCAGAGTCCAGTCGCCGTTCTTCTCCACACGCTTCATGAAGAGATCCGGGATC 88132
Query 63294 CAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63353
|| || || | || || || | | | || || ||||| ||||| ||
Sbjct 88131 CAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCGTGGTTCTTCCGCAGG 88072
Query 63354 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63413
||||||||| | | | ||||| ||||| || |||| ||| ||||| | | | || ||
Sbjct 88071 TCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACCGGGG 88012
Query 63414 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63473
|| || || || |||||||| | ||||| || ||||| || | || | |||||| ||
Sbjct 88011 CGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGCAACATAGGG 87952
Query 63474 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTA 63533
|| || || || || | || ||||| || | ||| ||| || ||||||| ||
Sbjct 87951 ATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAGCCGGTGGCACGGATGCGG 87892
Query 63534 CTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 63591
| |||| |||| || || || ||||| || ||||| | || || || | |
Sbjct 87891 TGGACGTTGA--GACCAATGCCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTCAGGG 87834
Query 63592 TGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTT 63651
| ||||||||||| || ||||| || || |||||| || || || || |||| |
Sbjct 87833 TATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGGAAGCACGACGACAACT 87774
Query 63652 GGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 63711
| ||| || || ||||| || | || || || ||||| || || | || | |
Sbjct 87773 GCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGTGTGAAGAACTTGTTGG 87714
Query 63712 A-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT----CCCATTGATGAATTCCTAC 63766
| | |||| ||||| ||||||| | | || || | ||| |||| || ||
Sbjct 87713 ACATGTAG-TTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCCCCCAGATG----CCAAC 87659
Query 63767 TGCGACACGCATTAACATGTGCTGAGG 63793
||||||||||| | ||||||||| ||
Sbjct 87658 AGCGACACGCATCAGCATGTGCTGTGG 87632
>seq1610
Length=70883
Score = 122 bits (134), Expect = 1e-22
Identities = 158/218 (72%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632
|||| ||| || ||||| || ||||||||||||||| | | || | |||||| ||
Sbjct 62189 AACAGCAAGCAGGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGTTCGTTGGAG 62130
Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692
|| || || || ||||| || |||||||| || ||||| || ||||||||||| | ||
Sbjct 62129 AAGGTCAGGCCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAAGCGCCA 62070
Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCG 33749
||||| || ||||| || |||||||| |||| ||| | || | || | |
Sbjct 62069 CTGAAGAAAATACCTTCGACAGCAGCAAATGCAACAAGGCGCTGAGCGTAGGTAGACTCA 62010
Query 33750 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 33787
| ||| || |||||| | ||||||| |||||||||||
Sbjct 62009 CGGTCCTGGATCCACCTCAGAGCCCAGTCGGCCTTCTT 61972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629797335618720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |