Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq229 120 3e-22 >seq229 Length=27093 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 20877 ATCTTCAGCCGCGGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACG 20936 |||| |||| ||| ||| ||||| || | |||||| | | || | || ||| Sbjct 20443 ATCTCCAGCTCCGGGAACTCGCGCGGCTCCCGCTCCAGCTGCGTCCGGAGCGCGTCCACG 20384 Query 20937 TGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCC 20996 |||| ||| ||||| ||||| |||| | |||| | | |||||| ||| | Sbjct 20383 TGGTCCACGTAGACGTGCGCGTCGCCCATGACGTGCGTCAGGCTGCCCGGGACGAGGTCA 20324 Query 20997 GTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCG 21056 ||||| ||||||| | |||||| || ||||||||||||||||| ||||| || ||| Sbjct 20323 CACACGTGCGCGATCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCG 20264 Query 21057 AGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAG 21092 |||||||| ||| ||||| |||||||||||||||| Sbjct 20263 AGGCCCATATCGCAGGACCGCTGGTACAGCTGGCAG 20228 Score = 114 bits (126), Expect = 1e-20 Identities = 216/309 (70%), Gaps = 9/309 (3%) Strand=Plus/Minus Query 21110 CACGTAAAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGG 21168 |||||| ||||| | |||| | ||| || || || || ||||| | |||||| || Sbjct 20126 CACGTAGAACTG-CGCAAACATGTGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTTGG 20068 Query 21169 GGTTCCACGCGCACATAACGATGCGCCGATCGT--GGGGCCGCCTGTTAATTAGATCCAC 21226 |||||||||||| || | ||| ||||| |||| ||| || | | || | ||| Sbjct 20067 GGTTCCACGCGCTCAGGATGATCCGCCGGTCGTACGGGTTCGTCCGCAGCTT--GTGCAC 20010 Query 21227 CACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTC 21286 || | ||||||||| || ||||| || |||||| ||| || | |||||| Sbjct 20009 GACCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTACTC 19950 Query 21287 CGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTC 21346 || || || || | |||||||||||||||||| || || || |||||||| ||||| Sbjct 19949 GGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGGTG 19890 Query 21347 CCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGC 21405 | | | |||| ||| | ||| || ||||| || |||| ||||||| || || |||| Sbjct 19889 CGCCAGGCCC-ACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGC 19831 Query 21406 CGCGGCGCG 21414 | | ||||| Sbjct 19830 C-CTGCGCG 19823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427762580399520