Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq17 154 2e-32
seq1610 113 6e-20
>seq17
Length=201905
Score = 154 bits (170), Expect = 2e-32
Identities = 393/593 (66%), Gaps = 14/593 (2%)
Strand=Plus/Minus
Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATA 72033
|| || || || || || ||||||| | ||| || || | | | || || |||||
Sbjct 88206 CCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCCACACGCTTCATG 88147
Query 72034 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 72093
|||||||| || ||||| || || | || || || | | | ||| || |||||
Sbjct 88146 AAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCG 88087
Query 72094 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 72153
||||| || ||||||||| | | | ||||| ||||| || |||| ||| |||
Sbjct 88086 TGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATG 88027
Query 72154 GCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 72213
|| | | | || || || || || || |||||||| | ||||| || ||||| || |
Sbjct 88026 GCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAG 87967
Query 72214 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 72273
|| | |||||| || || || |||||||| | || ||||| || | ||| ||| ||
Sbjct 87966 ACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAGCCG 87907
Query 72274 CTGGCACGAATATTGCTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 72331
||||||| || | | |||| |||| || || || ||||| || ||||| | |
Sbjct 87906 GTGGCACGGATGCGGTGGACGTTGA--GACCAATGCCTCCAGCCATCTTGGAGATCATGG 87849
Query 72332 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 72391
| || || | ||||||||||||||||| || || || ||| |||||| || || |
Sbjct 87848 CACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGGA 87789
Query 72392 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 72451
| || |||| || || || || ||||| || | || || || ||||| |
Sbjct 87788 AGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGTG 87729
Query 72452 TAAACCATTTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATAT----CCCA 72506
| || | || | |||| |||| ||||| ||||||| | | || || | |||
Sbjct 87728 TGAAGAACTTGTTGGACATGTAG-TTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCCCC 87670
Query 72507 TTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGA 72559
|||| || || ||||||||||| | ||| ||||| || | || ||||
Sbjct 87669 CAGATG----CCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCTCGACGA 87621
>seq1610
Length=70883
Score = 113 bits (124), Expect = 6e-20
Identities = 156/218 (72%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115
|||| ||| || ||||| || |||||||||||| || | | || | |||||||||
Sbjct 62189 AACAGCAAGCAGGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGTTCGTTGGAG 62130
Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175
|| || || || ||||| || |||||||| || ||||| || || || || || | |||
Sbjct 62129 AAGGTCAGGCCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAAGCGCCA 62070
Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCA 42232
||||| || ||||| || || ||||| |||| ||| | || | || | ||
Sbjct 62069 CTGAAGAAAATACCTTCGACAGCAGCAAATGCAACAAGGCGCTGAGCGTAGGTAGACTCA 62010
Query 42233 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 42270
| ||| || |||||| | ||||||| |||||||||||
Sbjct 62009 CGGTCCTGGATCCACCTCAGAGCCCAGTCGGCCTTCTT 61972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671117606096240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |