Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq229 104 2e-17 >seq229 Length=27093 Score = 104 bits (114), Expect = 2e-17 Identities = 215/315 (68%), Gaps = 10/315 (3%) Strand=Plus/Minus Query 25611 CACGTAAAACTG---ACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTT 25667 |||||| ||||| | ||||| | |||||| || || || || | || ||| || Sbjct 20126 CACGTAGAACTGCGCAAACATG---TGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTT 20070 Query 25668 AGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTT-GTCC-CTGATAAGATCC 25725 |||||||| |||| || |||||| | || ||| | ||||| |||| | | | | | Sbjct 20069 GGGGTTCCACGCGCTCAGGATGATCCGCCGGTCGTACGGGTTCGTCCGCAGCTTG--TGC 20012 Query 25726 GCGGTGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTAC 25785 || | |||||| || || ||| || | |||||| || | | ||| |||| Sbjct 20011 ACGACCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTAC 19952 Query 25786 TCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTG 25845 || || ||||| | || |||||||||||||||||| || || ||||| || || || | | Sbjct 19951 TCGGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGG 19892 Query 25846 TGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACC 25905 ||| | | |||| | |||| || | | || || ||| ||||||||||||| || Sbjct 19891 TGCGCCAGGCCCACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACG 19832 Query 25906 CCCTTCTCGGAGAGC 25920 |||| | || |||| Sbjct 19831 CCCTGCGCGCTGAGC 19817 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/193 (72%), Gaps = 3/193 (2%) Strand=Plus/Minus Query 25401 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCT 25460 ||||||| ||| ||||| ||| |||| || ||||| |||| ||||||||| ||||| Sbjct 20419 GGCTCCCGCTCCAGCTGCGTCCGGAGCGCGTCCACGTGGTCCACGTAGACGTGCGCGTCG 20360 Query 25461 CCCAGAGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGT 25519 |||| ||| | || || ||||| | || | |||| || ||||||| ||| Sbjct 20359 CCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCACACACGTGCGCGATCATGTGCGT 20301 Query 25520 GAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCT 25579 || || ||||||||||||||| || || || |||| ||||| | | | |||| || Sbjct 20300 CAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATAT-CGCAGGACCGCT 20242 Query 25580 GGTAGAGCTGACA 25592 |||| ||||| || Sbjct 20241 GGTACAGCTGGCA 20229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340126929670902