Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq229 104 2e-17
>seq229
Length=27093
Score = 104 bits (114), Expect = 2e-17
Identities = 215/315 (68%), Gaps = 10/315 (3%)
Strand=Plus/Minus
Query 25611 CACGTAAAACTG---ACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTT 25667
|||||| ||||| | ||||| | |||||| || || || || | || ||| ||
Sbjct 20126 CACGTAGAACTGCGCAAACATG---TGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTT 20070
Query 25668 AGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTT-GTCC-CTGATAAGATCC 25725
|||||||| |||| || |||||| | || ||| | ||||| |||| | | | | |
Sbjct 20069 GGGGTTCCACGCGCTCAGGATGATCCGCCGGTCGTACGGGTTCGTCCGCAGCTTG--TGC 20012
Query 25726 GCGGTGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTAC 25785
|| | |||||| || || ||| || | |||||| || | | ||| ||||
Sbjct 20011 ACGACCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTAC 19952
Query 25786 TCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTG 25845
|| || ||||| | || |||||||||||||||||| || || ||||| || || || | |
Sbjct 19951 TCGGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGG 19892
Query 25846 TGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACC 25905
||| | | |||| | |||| || | | || || ||| ||||||||||||| ||
Sbjct 19891 TGCGCCAGGCCCACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACG 19832
Query 25906 CCCTTCTCGGAGAGC 25920
|||| | || ||||
Sbjct 19831 CCCTGCGCGCTGAGC 19817
Score = 89.7 bits (98), Expect = 3e-13
Identities = 138/193 (72%), Gaps = 3/193 (2%)
Strand=Plus/Minus
Query 25401 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCT 25460
||||||| ||| ||||| ||| |||| || ||||| |||| ||||||||| |||||
Sbjct 20419 GGCTCCCGCTCCAGCTGCGTCCGGAGCGCGTCCACGTGGTCCACGTAGACGTGCGCGTCG 20360
Query 25461 CCCAGAGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGT 25519
|||| ||| | || || ||||| | || | |||| || ||||||| |||
Sbjct 20359 CCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCACACACGTGCGCGATCATGTGCGT 20301
Query 25520 GAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCT 25579
|| || ||||||||||||||| || || || |||| ||||| | | | |||| ||
Sbjct 20300 CAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATAT-CGCAGGACCGCT 20242
Query 25580 GGTAGAGCTGACA 25592
|||| ||||| ||
Sbjct 20241 GGTACAGCTGGCA 20229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340126929670902
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |