Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq1883 102 7e-17
>seq1883
Length=75506
Score = 102 bits (112), Expect = 7e-17
Identities = 149/206 (72%), Gaps = 6/206 (3%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582
|| || ||| |||||| || |||||||| || | || | || || ||||||| |||||
Sbjct 35430 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGC-CGTCCTCAAGCTG 35488
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| ||| || | || | ||||||||||||| || | || ||||||||| || ||
Sbjct 35489 CTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTT 35548
Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700
||| | | | || ||||| |||| |||||| ||||| || || || || |||
Sbjct 35549 GGCCTTCACGTTGTCG--ATGGTGTCGGACGACTCCACCTCGAGGGTGATCGTCTTGCCG 35606
Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726
|||||||| || || || ||||||||
Sbjct 35607 GTGAGAGTCTTGACGAAGATCTGCAT 35632
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421237985086574
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |