Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1883 102 7e-17 >seq1883 Length=75506 Score = 102 bits (112), Expect = 7e-17 Identities = 149/206 (72%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582 || || ||| |||||| || |||||||| || | || | || || ||||||| ||||| Sbjct 35430 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGC-CGTCCTCAAGCTG 35488 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| || | || | ||||||||||||| || | || ||||||||| || || Sbjct 35489 CTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTT 35548 Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700 ||| | | | || ||||| |||| |||||| ||||| || || || || ||| Sbjct 35549 GGCCTTCACGTTGTCG--ATGGTGTCGGACGACTCCACCTCGAGGGTGATCGTCTTGCCG 35606 Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726 |||||||| || || || |||||||| Sbjct 35607 GTGAGAGTCTTGACGAAGATCTGCAT 35632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421237985086574