Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq205 104 4e-18 seq84 98.7 2e-16 >seq205 Length=31205 Score = 104 bits (114), Expect = 4e-18 Identities = 85/101 (84%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||| |||||| || |||||||| || ||||| ||||| || || Sbjct 1152 GCCAAGCGTCACCGGAAGAT-TCTTCGTGACAACATCCAGGGTATCACAAAGCCCGCCAT 1094 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| |||||||||||||| ||||||||| |||||| Sbjct 1093 CCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 1053 Score = 86.0 bits (94), Expect = 1e-12 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 16570 CTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGAC 16629 |||||| || || |||| |||||| || ||| ||||||||||| || || ||||| Sbjct 922 CTTCCTGGAGGGTGTCATCCGTGATGCCGTCACCTACACCGAGCACGCCAAGCGCAAGAC 863 Query 16630 TGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTT 16689 ||||||||| | || |||||||||| |||| || |||||||| | | || ||||| Sbjct 862 CGTCACCTCCCTCGACGTCGTCTATGCCCTGAAGCGACAAGGCCGCACCCTCTACGGTTT 803 Query 16690 TGGAAGTTAA 16699 || ||||| Sbjct 802 CGGTGGTTAA 793 >seq84 Length=81642 Score = 98.7 bits (108), Expect = 2e-16 Identities = 84/101 (83%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||| |||||| || |||||||| || || |||||||| || || Sbjct 45735 GCCAAGCGCCACCGAAAGAT-TCTTCGTGACAACATCCAGGGTATTACCAAGCCCGCCAT 45677 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| |||||||||||||| ||||||||| |||||| Sbjct 45676 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 45636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79072846573782