Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq17 399 6e-106
>seq17
Length=201905
Score = 399 bits (442), Expect = 6e-106
Identities = 1080/1633 (66%), Gaps = 37/1633 (2%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| ||||| ||||||| ||| |||||| || || | | | | ||| |||| ||
Sbjct 87725 TTCACACACGCGTCGCCAACGCTGTTCAATGCCGGCACGCCTCAGGCGCAGTTGTCGTCG 87784
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| || | | |||||||| || ||| ||||| |||| ||| || || ||||
Sbjct 87785 TGCTTCCTCGTTGACATGAAGGAGGACAGCATTGAGGGCATCTATGATACCCTGAAGACC 87844
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725
||||| | || ||||||| || || || |||||| | | || ||||| | |||||
Sbjct 87845 TGTGCCATGATCTCCAAGATGGCTGGAGGCATTGGTCTCAACG-TCCACCGCATCCGTGC 87903
Query 363726 -ACAGAACAGTTACATTCGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783
|| | | ||||| ||| ||||| || || ||||| | | || ||| |
Sbjct 87904 CACCGG-CTCCTACAT-CGCTGGCACCAACGGCACGTCCAATGGCATCATCCCTATGTTG 87961
Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843
||||| || |||| ||||| | |||||||| |||||||| |||||| || ||
Sbjct 87962 CGTGTCTTCAACAACACTGCCCGATACGTCGATCAGGGTGGCAATAAGCGCCCCGGTGCT 88021
Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903
||||| || || || ||||| || || ||| | || ||||| || || || |||||
Sbjct 88022 TTTGCCATCTACCTGGAGCCATGGCACGCTGATGTCTTCGAGTTCCTCGACCTGCGGAAG 88081
Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963
||| ||||| || || | ||||| ||||| || ||| ||| || ||| | | ||
Sbjct 88082 AACCACGGAAAGGAAGAGGTCCGTGCTCGTGACCTCTTCCTTGCCCTCTGGATCCCGGAT 88141
Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAAT 364021
| || |||||||| |||||| | | | | | ||| | || | ||||| |||| |
Sbjct 88142 CTCTTCATGAAGCGTGTGGAG--AAGAACGGCGACTGGACTCTGATGTGCCCCAACGAGT 88199
Query 364022 GTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAAT 364081
| || || ||| |||| | || || || | | ||||| ||||| ||||| ||
Sbjct 88200 GCCCCGGCCTTGCCGACTGCTACGGCGAGGAGTTCGAGGCTCTGTACGAGAAGTACGAGC 88259
Query 364082 CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141
||||| | | ||||| | || |||||||| |||| ||||||| | ||
Sbjct 88260 GCGAGGGTCGCGGCCAAAAGACCCTGAAGGCGCAGAAGCTCTGGTATGCCATCCTCGAGG 88319
Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201
| || | |||||||| | |||| ||||||||||| ||| |||||||||| ||
Sbjct 88320 CTCAAACCGAGACAGGCAACCCCTTCATGTTGTACAAGGATCACGCCAACCGCAAGAGCA 88379
Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATAC 364260
||||| || ||||||| || |||| |||| |||||| || || ||||| || || ||
Sbjct 88380 ACCAGAAGAACCTTGGCACCATTC-GCAGCTCCAACCTTTGCACTGAGATCATCGAGTAT 88438
Query 364261 ACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG-- 364318
| ||||| |||||| ||| || || ||||| ||||| ||||| || || ||| |
Sbjct 88439 TCTGCTCCTGACGAGGTTGCTGTCTGCAACCTGGCGTCTATCGCCCTGCCACAGTTCGTC 88498
Query 364319 ---TAAAAG-ATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTA 364372
|| || ||| | | || |||| || | || || ||| | || | |
Sbjct 88499 GACTACGAGAATGAGCGCTATAACTTCCAGTTGCTGCACGAAGTCACCCAGGTCGTCGT- 88557
Query 364373 CTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCC-----GA 364427
| |||| || ||||| | ||||| | || | ||||| |||| || ||| ||
Sbjct 88558 -TCGCAACCTGAACAAGATCATCGATATCAACCACTATCCTGTTCCGGAGGCCCGCAAGA 88616
Query 364428 GCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTT 364487
|| || ||||| || || || ||||| | || || ||||| || || || | |||
Sbjct 88617 GC-----AACATGCGCCACCGTCCTATTGGCGTGGGCGTCCAGGGTCTGGCCGATGCTTT 88671
Query 364488 TATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTT 364547
|| ||| ||| | || || || ||||| ||||||| || || ||| |||||||
Sbjct 88672 CTTGGCCCTCCGCATGCCTTTCGAGTCACCTGAGGCTCGTGAGCTGAACAAGCAGATCTT 88731
Query 364548 TGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAA 364607
|| || || || ||||| | || || |||||||| | || || | ||
Sbjct 88732 CGAGACCATCTACCACGCCGCCCTCACCGCATCGTGTGACATTGCCAAGGTTGATGGCCC 88791
Query 364608 GTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGG-- 364665
||||| | || ||||| || || | || ||||| | | |||| || | |||
Sbjct 88792 CTACTCATCATACGAGGGATCTCCCGTCTCCCAGGGTATCCTGCAGTACGACATGTGGAA 88851
Query 364666 -AATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCA 364724
||||||| ||| |||| | ||| ||||||| | | |||| | ||| ||||
Sbjct 88852 CAATGTCAAGCCCTCTGATCTCTGGGACTGGGACGCCTTGAAGGCCAAGATCAAGCAGCA 88911
Query 364725 TGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCT 364784
||| |||||| | | | | |||||||||||||| || || ||| | ||||||||
Sbjct 88912 CGGTGTCCGCAACAGCTTGTTGATGGCGCCCATGCCCACTGCCTCGACTTCGCAGATCCT 88971
Query 364785 CGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTC 364844
|| |||||||||||||| || || | |||| ||| | ||| ||||| || || |
Sbjct 88972 GGGCAACAACGAGTGCTTTGAGCCCTATACATCCAACATCTATCAGCGCCGCGTGCTCGC 89031
Query 364845 CGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTG 364904
|| || || | || || ||| | || |||||||||| | | || |||||
Sbjct 89032 TGGCGAGTTCCAAGTTGTCAATCCATGGCTGCTCAAGGATCTGGTGCAGTGTGGTCTGTG 89091
Query 364905 GGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTC-CAG 364963
| ||| | |||||||| |||||||| | |||| ||| | ||||| |||| |||
Sbjct 89092 GTCTGAGGACCTGAAGAACCGCATCATCGCTGAGGATGGCTCTATCCAGAATATTCGCAG 89151
Query 364964 GATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTC 365023
| | ||||| || | ||| | | ||||| ||||| ||||| || || | | ||
Sbjct 89152 CA-TCCCAGATGACATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCGCAGAGGACCA 89210
Query 365024 TCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTAT 365083
|| | | ||||| |||||||| ||||| || ||| ||| ||||||| | ||| ||
Sbjct 89211 TCGTGCAGATGGCTGCCGATCGTGGTGCCTTCATCGACCAGTCCCAGTCGCTGAACATAC 89270
Query 365084 TCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCG 365143
|||| | |||| | | |||| | || |||||| ||| ||| ||||| |
Sbjct 89271 ACATGCGTGAGCCTTCTATGGGCAAGATCACTAGCATGCACTTCACCGGTTGGAAGCTGG 89330
Query 365144 GTCTTAAGACAGG 365156
|||| ||||| ||
Sbjct 89331 GTCTCAAGACTGG 89343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303310616212868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |