Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq17 399 6e-106 >seq17 Length=201905 Score = 399 bits (442), Expect = 6e-106 Identities = 1080/1633 (66%), Gaps = 37/1633 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| ||||| ||||||| ||| |||||| || || | | | | ||| |||| || Sbjct 87725 TTCACACACGCGTCGCCAACGCTGTTCAATGCCGGCACGCCTCAGGCGCAGTTGTCGTCG 87784 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | |||||||| || ||| ||||| |||| ||| || || |||| Sbjct 87785 TGCTTCCTCGTTGACATGAAGGAGGACAGCATTGAGGGCATCTATGATACCCTGAAGACC 87844 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 ||||| | || ||||||| || || || |||||| | | || ||||| | ||||| Sbjct 87845 TGTGCCATGATCTCCAAGATGGCTGGAGGCATTGGTCTCAACG-TCCACCGCATCCGTGC 87903 Query 363726 -ACAGAACAGTTACATTCGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 || | | ||||| ||| ||||| || || ||||| | | || ||| | Sbjct 87904 CACCGG-CTCCTACAT-CGCTGGCACCAACGGCACGTCCAATGGCATCATCCCTATGTTG 87961 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 ||||| || |||| ||||| | |||||||| |||||||| |||||| || || Sbjct 87962 CGTGTCTTCAACAACACTGCCCGATACGTCGATCAGGGTGGCAATAAGCGCCCCGGTGCT 88021 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903 ||||| || || || ||||| || || ||| | || ||||| || || || ||||| Sbjct 88022 TTTGCCATCTACCTGGAGCCATGGCACGCTGATGTCTTCGAGTTCCTCGACCTGCGGAAG 88081 Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 ||| ||||| || || | ||||| ||||| || ||| ||| || ||| | | || Sbjct 88082 AACCACGGAAAGGAAGAGGTCCGTGCTCGTGACCTCTTCCTTGCCCTCTGGATCCCGGAT 88141 Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAAT 364021 | || |||||||| |||||| | | | | | ||| | || | ||||| |||| | Sbjct 88142 CTCTTCATGAAGCGTGTGGAG--AAGAACGGCGACTGGACTCTGATGTGCCCCAACGAGT 88199 Query 364022 GTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAAT 364081 | || || ||| |||| | || || || | | ||||| ||||| ||||| || Sbjct 88200 GCCCCGGCCTTGCCGACTGCTACGGCGAGGAGTTCGAGGCTCTGTACGAGAAGTACGAGC 88259 Query 364082 CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141 ||||| | | ||||| | || |||||||| |||| ||||||| | || Sbjct 88260 GCGAGGGTCGCGGCCAAAAGACCCTGAAGGCGCAGAAGCTCTGGTATGCCATCCTCGAGG 88319 Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201 | || | |||||||| | |||| ||||||||||| ||| |||||||||| || Sbjct 88320 CTCAAACCGAGACAGGCAACCCCTTCATGTTGTACAAGGATCACGCCAACCGCAAGAGCA 88379 Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATAC 364260 ||||| || ||||||| || |||| |||| |||||| || || ||||| || || || Sbjct 88380 ACCAGAAGAACCTTGGCACCATTC-GCAGCTCCAACCTTTGCACTGAGATCATCGAGTAT 88438 Query 364261 ACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG-- 364318 | ||||| |||||| ||| || || ||||| ||||| ||||| || || ||| | Sbjct 88439 TCTGCTCCTGACGAGGTTGCTGTCTGCAACCTGGCGTCTATCGCCCTGCCACAGTTCGTC 88498 Query 364319 ---TAAAAG-ATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTA 364372 || || ||| | | || |||| || | || || ||| | || | | Sbjct 88499 GACTACGAGAATGAGCGCTATAACTTCCAGTTGCTGCACGAAGTCACCCAGGTCGTCGT- 88557 Query 364373 CTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCC-----GA 364427 | |||| || ||||| | ||||| | || | ||||| |||| || ||| || Sbjct 88558 -TCGCAACCTGAACAAGATCATCGATATCAACCACTATCCTGTTCCGGAGGCCCGCAAGA 88616 Query 364428 GCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTT 364487 || || ||||| || || || ||||| | || || ||||| || || || | ||| Sbjct 88617 GC-----AACATGCGCCACCGTCCTATTGGCGTGGGCGTCCAGGGTCTGGCCGATGCTTT 88671 Query 364488 TATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTT 364547 || ||| ||| | || || || ||||| ||||||| || || ||| ||||||| Sbjct 88672 CTTGGCCCTCCGCATGCCTTTCGAGTCACCTGAGGCTCGTGAGCTGAACAAGCAGATCTT 88731 Query 364548 TGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAA 364607 || || || || ||||| | || || |||||||| | || || | || Sbjct 88732 CGAGACCATCTACCACGCCGCCCTCACCGCATCGTGTGACATTGCCAAGGTTGATGGCCC 88791 Query 364608 GTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGG-- 364665 ||||| | || ||||| || || | || ||||| | | |||| || | ||| Sbjct 88792 CTACTCATCATACGAGGGATCTCCCGTCTCCCAGGGTATCCTGCAGTACGACATGTGGAA 88851 Query 364666 -AATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCA 364724 ||||||| ||| |||| | ||| ||||||| | | |||| | ||| |||| Sbjct 88852 CAATGTCAAGCCCTCTGATCTCTGGGACTGGGACGCCTTGAAGGCCAAGATCAAGCAGCA 88911 Query 364725 TGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCT 364784 ||| |||||| | | | | |||||||||||||| || || ||| | |||||||| Sbjct 88912 CGGTGTCCGCAACAGCTTGTTGATGGCGCCCATGCCCACTGCCTCGACTTCGCAGATCCT 88971 Query 364785 CGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTC 364844 || |||||||||||||| || || | |||| ||| | ||| ||||| || || | Sbjct 88972 GGGCAACAACGAGTGCTTTGAGCCCTATACATCCAACATCTATCAGCGCCGCGTGCTCGC 89031 Query 364845 CGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTG 364904 || || || | || || ||| | || |||||||||| | | || ||||| Sbjct 89032 TGGCGAGTTCCAAGTTGTCAATCCATGGCTGCTCAAGGATCTGGTGCAGTGTGGTCTGTG 89091 Query 364905 GGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTC-CAG 364963 | ||| | |||||||| |||||||| | |||| ||| | ||||| |||| ||| Sbjct 89092 GTCTGAGGACCTGAAGAACCGCATCATCGCTGAGGATGGCTCTATCCAGAATATTCGCAG 89151 Query 364964 GATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTC 365023 | | ||||| || | ||| | | ||||| ||||| ||||| || || | | || Sbjct 89152 CA-TCCCAGATGACATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCGCAGAGGACCA 89210 Query 365024 TCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTAT 365083 || | | ||||| |||||||| ||||| || ||| ||| ||||||| | ||| || Sbjct 89211 TCGTGCAGATGGCTGCCGATCGTGGTGCCTTCATCGACCAGTCCCAGTCGCTGAACATAC 89270 Query 365084 TCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCG 365143 |||| | |||| | | |||| | || |||||| ||| ||| ||||| | Sbjct 89271 ACATGCGTGAGCCTTCTATGGGCAAGATCACTAGCATGCACTTCACCGGTTGGAAGCTGG 89330 Query 365144 GTCTTAAGACAGG 365156 |||| ||||| || Sbjct 89331 GTCTCAAGACTGG 89343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303310616212868