Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq17 159 4e-34
seq1610 116 5e-21
>seq17
Length=201905
Score = 159 bits (176), Expect = 4e-34
Identities = 396/596 (66%), Gaps = 14/596 (2%)
Strand=Plus/Minus
Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079
|| || || || || | || ||||||| | ||| || |||| | || ||| || |||
Sbjct 88209 AGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCCACACGCTTC 88150
Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139
|| |||||||| || ||||| || || | || || || | | | || || |||
Sbjct 88149 ATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTT 88090
Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199
|| ||||| || ||||||||| | | | ||||| ||||| || |||| |||
Sbjct 88089 CCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAG 88030
Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259
||||| | | | || || || || || || |||||||| | ||||| || ||||| ||
Sbjct 88029 ATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTG 87970
Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319
| || | |||||| || || || |||||||| || || ||||| || | ||| |||
Sbjct 87969 AAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAG 87910
Query 63320 CCACTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377
|| ||||||| || | |||| |||| || || || ||||| || ||||| |
Sbjct 87909 CCGGTGGCACGGATGCGGTGGACGTTGA--GACCAATGCCTCCAGCCATCTTGGAGATCA 87852
Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437
|| || || | ||||||||||||||||| || || || ||| |||||| || |
Sbjct 87851 TGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGA 87792
Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497
| || || |||| || || || || ||||| || | || || || ||||
Sbjct 87791 GGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGT 87732
Query 63498 GAGTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT----C 63552
| || || | || | || | |||| ||||| ||||||| | | || || | |
Sbjct 87731 GTGTGAAGAACTTGTTGGACATGTAG-TTGTAGGTCTCAAGAACCCTCTCGATGTTGTCC 87673
Query 63553 CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 63608
|| |||| || || ||||||||||| | ||||||||| || | || ||||
Sbjct 87672 CCCCAGATG----CCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCTCGACGA 87621
>seq1610
Length=70883
Score = 116 bits (128), Expect = 5e-21
Identities = 157/218 (72%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711
|||| ||| || ||||| || ||| ||||||||||| | | || | |||||||||
Sbjct 62189 AACAGCAAGCAGGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGTTCGTTGGAG 62130
Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771
|| || || || ||||| || |||||||| || ||||| || ||||| || || | |||
Sbjct 62129 AAGGTCAGGCCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAAGCGCCA 62070
Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCG 32828
|||||||| ||||| || || ||||| |||| ||| | || | || | |
Sbjct 62069 CTGAAGAAAATACCTTCGACAGCAGCAAATGCAACAAGGCGCTGAGCGTAGGTAGACTCA 62010
Query 32829 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 32866
| ||| || |||||| | ||||||| |||||||||||
Sbjct 62009 CGGTCCTGGATCCACCTCAGAGCCCAGTCGGCCTTCTT 61972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633611612890400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |