Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq1883 118 9e-22
seq5 118 9e-22
seq9 107 2e-18
>seq1883
Length=75506
Score = 118 bits (130), Expect = 9e-22
Identities = 146/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| || || || || || | ||||| || || |||||||||| || || ||
Sbjct 35863 AAGATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCC 35804
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || ||| | ||| || |||| || || || ||||||||||| || || || ||
Sbjct 35803 TCTGACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGAC 35744
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || || || || || || ||||| ||| | |||||| ||||||| ||||||| |||
Sbjct 35743 CAGCAGCGCCTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTAC 35684
Query 22396 AACATTCAAAAAGAATCCAC 22415
||||| || || || || ||
Sbjct 35683 AACATCCAGAAGGAGTCGAC 35664
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || | || || || ||| |||| || || |||||| | |
Sbjct 35404 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCATCG 35345
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || || ||||||||||||||||||||||| || || ||
Sbjct 35344 GACACGATCGACAACGTGAAGGCCAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAG 35285
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| |||||||| ||||| ||||| ||| | || || ||| || | || || ||||||
Sbjct 35284 CAGCGTCTTATCTTTGCGGGCAAGCAGCTGGAAGACGGCCGGACGCTGTCTGACTACAAC 35225
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
||||| || || || || | || || || |||| |||| || ||
Sbjct 35224 ATTCAGAAGGAGTCGACGCTGCACTTGGTGCTGCGTCTGCGTGGTGG 35178
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||| | ||||| || ||| |||| || || ||||| | ||
Sbjct 35632 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACGATCACCCTCGAGGTGGAGTCGTCC 35573
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | | || || || || |||||||||||||| || || |||||
Sbjct 35572 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCAG 35513
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || ||||| || ||| | ||||| |||||| | ||||| ||||||
Sbjct 35512 CAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACTCTGTCCGACTACAAC 35453
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || || |||||
Sbjct 35452 ATCCAGAAGGAGTCCAC 35436
>seq5
Length=272196
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | || || || || |||| ||||| ||||| | ||
Sbjct 174361 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCC 174302
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || |||| || || || ||||||||||||||||| || || |||
Sbjct 174301 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAA 174242
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || || ||||| ||| | ||||| ||| ||| ||||||| || |||
Sbjct 174241 CAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTATAAC 174182
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || |||||| | || | || |||| |||| || |||
Sbjct 174181 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGCCTGCGTGGTGGT 174134
>seq9
Length=228969
Score = 107 bits (118), Expect = 2e-18
Identities = 131/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 22228 TTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTG 22287
|| || || ||| | || ||||| || |||| ||||| ||||| | |||| ||| |
Sbjct 118475 TTCGTGAAGACTCTGACGGGTAAGACTATCACCCTTGAGGTGGAGTCTTCCGACACCATC 118416
Query 22288 GACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTT 22347
||| | |||| || || || |||||||||||||| || || |||||||| || |
Sbjct 118415 GACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCAACAGCGATTG 118356
Query 22348 ATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| || |||||||| ||| | |||||| |||||| | ||||| |||||||| || ||
Sbjct 118355 ATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAA 118297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419714832870310
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |