Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1610 120 6e-22 seq7 100 6e-16 seq2236 95.1 2e-14 >seq1610 Length=70883 Score = 120 bits (132), Expect = 6e-22 Identities = 292/432 (68%), Gaps = 14/432 (3%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||| || | || ||||| ||||||||||||||| ||||| || Sbjct 62447 TCGAAGAAGTTGGTCTTCCCGCCAAGGGAGATGTTCTCCATGAAGTCGAAAGGGTTAGTA 62388 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | ||||| ||| | ||| || || |||| || ||||| || || || || | Sbjct 62387 GACTTGTAGATCTTCTCGTTGCCGAGAGCGACGAGGAGACGGTCGGCGACGAATTCGATG 62328 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| ||||| | | |||||||| | | ||| || | ||||| | | Sbjct 62327 TACTGCTTCATCAAGTTGGCATTCATGCCGAGTAGGGCACAGGGCAAGGCCTCGGTCAGG 62268 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTG-TGC---CAGAGA 251798 || ||||| || ||||||| || || | || || | ||| | ||| | | | Sbjct 62267 AACTCCTTCTCAATGGCAACAGCATCGGTAATGATGGCTTCCACGCGCTGCTTGCTGGGG 62208 Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGA-GCTCGCCAAA-CTGTTGGTGCAGACCCTCG 251856 | | |||||| || | |||| |||| | || || || | || ||||||||||||| Sbjct 62207 CGG-TTGTTC---AGGTGTGAGAACAGCAAGCAGGCGAAGTCAGT--GTGCAGACCCTCG 62154 Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916 || ||| ||||| |||||||| | |||||||||||||| ||||| ||| | ||| Sbjct 62153 TCACGAGAGATGAGTTCGTTGGAGAAGGTCAGGCCAGGCATCAGACCACGCTTCTTCAGC 62094 Query 251917 CAGAAGATTGC-GCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAAC 251975 |||||||| | || |||| ||| ||| | | ||| |||||| | ||||||| Sbjct 62093 CAGAAGATGGAAGCGAAAGCG-CCACTGAAGAAAATACCTTCGACAGCAGCAAATGCAAC 62035 Query 251976 AAGGCGCTCAGC 251987 |||||||| ||| Sbjct 62034 AAGGCGCTGAGC 62023 >seq7 Length=232781 Score = 100 bits (110), Expect = 6e-16 Identities = 429/670 (64%), Gaps = 35/670 (5%) Strand=Plus/Minus Query 279701 TTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGC 279760 ||| ||||| ||||||||||||||||||||||| || || ||| || | | | Sbjct 207587 TTCCCTGTCCGGTGGTTGGAAGATGAAGCTGGCTCTGTGCCGTGCCGTTTTCGAGAACCC 207528 Query 279761 CGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCT 279820 ||| | || ||||| || ||||| ||||||||| |||| || ||||| |||||||| Sbjct 207527 CGACATTCTGCTGCTGGACGAGCCCACCAACCACCTGGATGTCAAGAACGTTGCCTGGCT 207468 Query 279821 AGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGG 279880 | | |||||| | | | | | ||| | ||| |||| ||||||||||||||||| Sbjct 207467 CGAGGACTACCTCAAGA-ACAGCA-CATG-CACGTCCATCATGGTCTCTCACGACTCTGG 207411 Query 279881 CTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTCTCCAA 279940 ||||| | ||||||| |||| | |||| |||| | |||||| | Sbjct 207410 TTTCCTGAACCGCGTGTGCCAGTACATCGTCAACTACGAGC---GCTTCAAGCTCAAGAC 207354 Query 279941 GCACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCCGCCTACTATGA 280000 | ||| ||||||||| | |||||| || ||| | || | |||| || Sbjct 207353 GTACAAGGGCAACCTGGAGGACTTCGTGAGGCAGAACCCCGCTGCCAAGTCGTACTTCGA 207294 Query 280001 CCTGAAGGACGCCACCGCCA---AGTGGGAATTCCCTGAGCCAGGGTTTCTGGAGGGCAT 280057 || || ||| ||| | ||| ||||||||||| || || || || || | Sbjct 207293 GCT---GGGCGCATCCGAGATGGAGTTCTCCTTCCCTGAGCCTGGTTTCCTCGATGGTGT 207237 Query 280058 CACATCAAAGGATCGCGCAATCATGAAGCTCCGTGGC------GTCTCCTTTGCTTATCC 280111 || | |||| || ||| || |||| | | ||| || || Sbjct 207236 CAAGACCAAGGCCAAGGCTATC------CTGCGTGCCAACAAGATGGGCTTCCAGTACCC 207183 Query 280112 CAATGGCCCCAA----CATCTTCAGCAGTGTCAACTCGCAGGTTTCTATGAACTCACGGA 280167 ||| |||||| || || | | ||| || ||| || || ||| || | Sbjct 207182 CAACACCCCCAAGCCCCAGATTTCGGA-CATCACCTTCCAGTGCTCCCTGGGCTCCCGTA 207124 Query 280168 TTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCG 280227 ||| ||||| || ||||| ||||| || ||||||||||| |||| || || || | Sbjct 207123 TTGCCGTCATCGGTCCCAACGGTGCCGGCAAGTCTACCCTGGTCAACGTTCTCTGCGGTG 207064 Query 280228 A---GACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACG 280284 | || || |||| ||||| | ||| ||| ||||| || || || ||| Sbjct 207063 AGCTGATCC---CCACCGAGGGTGAGATCTGGTCGCACGAGAACATCCGTATTGCGTACA 207007 Query 280285 TCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACA 280344 || ||||||||||| ||||||||| ||||||||||||| ||| ||| | |||| Sbjct 207006 TCAAGCAGCACGCTTTTGCCCACATCGATAACCACCTGGACAAGACGCCTTCGGAGTACA 206947 Query 280345 TTCAGTGGCG 280354 |||| ||||| Sbjct 206946 TTCAATGGCG 206937 >seq2236 Length=43962 Score = 95.1 bits (104), Expect = 2e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 279695 AGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACT 279754 ||| || |||||||| || ||||||||||||||||| || ||| |||||||||| || | Sbjct 36272 AGTCGGCTCTCTGTCTGGCGGTTGGAAGATGAAGCTCGCTCTCGCTCGCGCCATGCTGCA 36213 Query 279755 GCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGA 279799 | ||||||||||| || || || || || || |||||| |||| Sbjct 36212 GAAGGCCGATGTCCTCCTCCTGGACGAACCGACTAACCACTTGGA 36168 Score = 93.3 bits (102), Expect = 9e-14 Identities = 133/185 (72%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233 ||||||| ||||| ||||| || ||||| || || ||||| | || || ||||||||| Sbjct 35790 TCATTGGTCCCAACGGTGCTGGCAAGTCGACTCTCATCAAGCTGCTCACCGGCGAGACC- 35732 Query 280234 AGGCCACTGAGGGGTCCGTTTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAG 280292 | ||| | || | | | |||||| ||||| |||| || | ||| || ||| Sbjct 35731 ATCCCAAGTACCGGAAAGGTCGAGAAGCACCCCAATCTGCGTATCGGATACATCAAGCAG 35672 Query 280293 CACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGG 280352 ||||| | | ||| |||||| |||||||| | ||| || ||||| ||| | |||||| Sbjct 35671 CACGCCCTGGAACACGTCGAGATGCACCTGGAGAAGACGCCCAACCAGTACCTGCAGTGG 35612 Query 280353 CGCTA 280357 ||||| Sbjct 35611 CGCTA 35607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027802902584734