Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq5 192 1e-43
seq1883 176 8e-39
seq9 129 1e-24
seq2 109 1e-18
seq7 105 1e-17
seq2236 86.0 1e-11
>seq5
Length=272196
Score = 192 bits (212), Expect = 1e-43
Identities = 181/231 (78%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||||| |||| ||| || |||||||| || ||||||||||| ||||||
Sbjct 174135 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGAG 174194
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| || || | |||||||| || |||
Sbjct 174195 AGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGA 174254
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| |||||||| ||||||||||| | || || ||
Sbjct 174255 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACC 174314
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| | |||||| || || |||||||||||||||||||| |||||||| |||
Sbjct 174315 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGATG 174365
>seq1883
Length=75506
Score = 176 bits (194), Expect = 8e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| |||||||| ||||| ||||| || || ||||| || || ||
Sbjct 35178 CCACCACGCAGACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGAC 35237
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| |||| || ||||| | |||||| || || || || || | || ||||| || |||
Sbjct 35238 AGCGTCCGGCCGTCTTCCAGCTGCTTGCCCGCAAAGATAAGACGCTGCTGGTCTGGGGGA 35297
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||||||||| ||||| ||| ||||| ||||| | |||||| ||
Sbjct 35298 ATACCCTCCTTGTCTTGAATCTTGGCCTTCACGTTGTCGATCGTGTCCGATGATTCCACC 35357
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || ||||| |||||||||||||| || |||||
Sbjct 35358 TCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 35404
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| || || | || | ||| ||||||||||| || |||||||| || |||||
Sbjct 35406 CCACCGCGGAGACGGAGGACAAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAC 35465
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| |||||||| ||||| | || || || || ||
Sbjct 35466 AGAGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGG 35525
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| ||||| ||| ||||||||||| | || || ||
Sbjct 35526 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGACGACTCCACC 35585
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || || ||||| ||||||||||| ||||||||
Sbjct 35586 TCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 35632
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| ||||| ||||| || |||||||| || ||||||
Sbjct 35634 CCGCCACGCAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAG 35693
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || || | || ||||| || ||
Sbjct 35694 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGG 35753
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| |||||||| || |||||||| | || || ||
Sbjct 35754 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGGACTCGACC 35813
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || || ||||||||||||||||| ||||||||
Sbjct 35814 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 35860
>seq9
Length=228969
Score = 129 bits (142), Expect = 1e-24
Identities = 136/179 (76%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||||| || || | ||||| || | |||||| |||||||| ||
Sbjct 118297 TTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 118356
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
| || ||||| || || || || || |||||||| || ||||| ||||||||| |||
Sbjct 118357 AATCGCTGTTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 118416
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| | || || || || | |||||| || || ||||| || ||||| |||||
Sbjct 118417 ATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCCGTCAGAGTCTTCACGAA 118475
>seq2
Length=396018
Score = 109 bits (120), Expect = 1e-18
Identities = 189/268 (71%), Gaps = 5/268 (2%)
Strand=Plus/Minus
Query 275303 GGTTTCAATATC-TCGTGCGCGACAACCGGCCGCATATGAAGAAGGCCGGCAACCTCCGG 275361
||||||||| | | ||||| || | || || | |||||||||| || |||||||||
Sbjct 59045 GGTTTCAATTACATTGTGCGGGATGATCGACCTCGATTGAAGAAGGCAGGTAACCTCCGG 58986
Query 275362 TCCGCCTTTACCAAGACAGACGGCGAATTCTTTGTCATCTTTGACGCCGACTTCTGCCCA 275421
| || ||||| |||||| || || || ||||||||||||||||| |||||||| ||
Sbjct 58985 TGGGCATTTACACGGACAGATGGAGACTTTTTTGTCATCTTTGACGCAGACTTCTGTCCT 58926
Query 275422 AGGCCCGACTTCCTCGAGGAGACACTTGGC-AGGATGAAGGCAGATCCCACGATTGCCAT 275480
| || |||||| || | ||| | | | || | | | ||| || ||| |||||
Sbjct 58925 CGACCAGACTTCATCAAAGAGCTTATCGTCGAGCACCTTGAC-GATGACAAGATCGCCAT 58867
Query 275481 CTTCCAAACTCCCCAGTTCTTCGAGCAGCGCA-ATGAGCAGAACTACGTGGAGAAGGGAG 275539
|||| | ||| ||||| ||| | | || ||||||||| | || ||| |||| |
Sbjct 58866 TGTCCAGAGTCCACAGTTTTTC-CGTGTCACAGATGAGCAGACGTGGGTTGAGCAGGGGG 58808
Query 275540 CCGGCGCCGTCCAGGAGCTCTTCTATCG 275567
|||| || || ||||||||||| ||
Sbjct 58807 CCGGTGCTACGCAAGAGCTCTTCTACCG 58780
>seq7
Length=232781
Score = 105 bits (116), Expect = 1e-17
Identities = 433/670 (65%), Gaps = 37/670 (6%)
Strand=Plus/Plus
Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040
||||| || ||||||| || ||| ||||||||||||| || || ||| |||||
Sbjct 206937 CGCCATTGAATGTACTCCGAAGGCGTCTTGTCCAGGTGGTTATCGATGTGGGCAAAAGCG 206996
Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA-CAGAGCCCCGAGTCGG 225099
||||| | |||||| || || ||||| ||| ||| | | | || || ||
Sbjct 206997 TGCTGCTTGATGTACGCAATACGGATGTTCTCGTGCGACCAGATCTCACCCTCGGTGGGG 207056
Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159
| || || ||| ||| || |||| || |||| |||||| ||||| ||||| || ||
Sbjct 207057 ATCAGC-TCACCGCAGAGAACGTTGACCAGGGTAGACTTGCCGGCACCGTTGGGACCGAT 207115
Query 225160 CACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGG--- 225216
||| |||| ||||| || | ||| || | | || | ||| |||| ||
Sbjct 207116 GACGGCAATACGGGAGCCCAGGGAGCACTGGAAGGTGATGT--CCGAA-ATCTGGGGCTT 207172
Query 225217 --GCCAGTTTGG-TAAGCAAAGGCCAC------GCCACGCAGCTTCATGATGGCACGGTC 225267
| ||| || || ||| ||| | ||||||| ||| || | |
Sbjct 207173 GGGGGTGTTGGGGTACTGGAAGCCCATCTTGTTGGCACGCAG------GATAGCCTTGGC 207226
Query 225268 CTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTC 225327
||||| | | ||| || ||||| || ||||| ||||| ||| || | | |
Sbjct 207227 CTTGGTCTTGACACCATCGAGGAAACCAGGCTCAGGGAAGGAGAACTCCATCTCGGATGC 207286
Query 225328 CTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCC--ACGAAAGCAGACAGGTTT 225385
||| ||| |||| || || |||| | | |||| ||||| | ||||||
Sbjct 207287 GCCCAGCTCGAAGTACGACTTGGCAGCGGG--GTTCTGCCTCACGAAGTCCTCCAGGTTG 207344
Query 225386 CCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCG 225445
|| || | || ||||||||| | || |||| | || || | |||||| |
Sbjct 207345 CCCTTGTACGTCTTGAGCTTGAAGCGCT---CGTAGTTGACGATGTACTGGCACACGCGG 207401
Query 225446 TCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAGGCCCTTGAG 225504
| ||||| ||||||||||| || || |||||||||| || || | | ||||||
Sbjct 207402 TTCAGGAAACCAGAGTCGTGAGAGACCATGATGGACGTGCATGTGCT----GTTCTTGAG 207457
Query 225505 GTGCGTGAT-GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAA 225563
|| || | |||||| || ||||| |||| |||| |||||| || || |||||||| |
Sbjct 207458 GTA-GTCCTCGAGCCAGGCAACGTTCTTGACATCCAGGTGGTTGGTGGGCTCGTCCAGCA 207516
Query 225564 GCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCC 225623
|||| ||||| | | || | ||| || |||| ||||||||| ||||| || |
Sbjct 207517 GCAGAATGTCGGGGTTCTCGAAAACGGCACGGCACAGAGCCAGCTTCATCTTCCAACCAC 207576
Query 225624 CGGACAGGGA 225633
||||||||||
Sbjct 207577 CGGACAGGGA 207586
>seq2236
Length=43962
Score = 86.0 bits (94), Expect = 1e-11
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037
|| |||||||| | |||||||||||| ||| | |||||||| |||| | || | |
Sbjct 35607 TAGCGCCACTGCAGGTACTGGTTGGGCGTCTTCTCCAGGTGCATCTCGACGTGTTCCAGG 35666
Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097
|| ||||| | ||| | || |||| ||||| |||||| || || | |
Sbjct 35667 GCGTGCTGCTTGATGTATCCGATACGCAGATTGGGGTGCTTCTCGACCTTTCCGGTACTT 35726
Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157
|| | |||||||||||| | ||||||||| || | |||||| ||||| ||||| |||
Sbjct 35727 GGGATGGTCTCGCCGGTGAGCAGCTTGATGAGAGTCGACTTGCCAGCACCGTTGGGACCA 35786
Query 225158 AT 225159
||
Sbjct 35787 AT 35788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921592746799280
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