Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq5 192 1e-43 seq1883 176 8e-39 seq9 129 1e-24 seq2 109 1e-18 seq7 105 1e-17 seq2236 86.0 1e-11 >seq5 Length=272196 Score = 192 bits (212), Expect = 1e-43 Identities = 181/231 (78%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||||| |||| ||| || |||||||| || ||||||||||| |||||| Sbjct 174135 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGAG 174194 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| || || | |||||||| || ||| Sbjct 174195 AGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGA 174254 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| |||||||| ||||||||||| | || || || Sbjct 174255 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACC 174314 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || | |||||| || || |||||||||||||||||||| |||||||| ||| Sbjct 174315 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGATG 174365 >seq1883 Length=75506 Score = 176 bits (194), Expect = 8e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||||||| ||||| ||||| || || ||||| || || || Sbjct 35178 CCACCACGCAGACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGAC 35237 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || |||| || ||||| | |||||| || || || || || | || ||||| || ||| Sbjct 35238 AGCGTCCGGCCGTCTTCCAGCTGCTTGCCCGCAAAGATAAGACGCTGCTGGTCTGGGGGA 35297 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||| ||||| ||| ||||| ||||| | |||||| || Sbjct 35298 ATACCCTCCTTGTCTTGAATCTTGGCCTTCACGTTGTCGATCGTGTCCGATGATTCCACC 35357 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || ||||| |||||||||||||| || ||||| Sbjct 35358 TCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 35404 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | || | ||| ||||||||||| || |||||||| || ||||| Sbjct 35406 CCACCGCGGAGACGGAGGACAAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAC 35465 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| ||||| | || || || || || Sbjct 35466 AGAGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGG 35525 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| ||||| ||| ||||||||||| | || || || Sbjct 35526 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGACGACTCCACC 35585 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || || ||||| ||||||||||| |||||||| Sbjct 35586 TCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 35632 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| ||||| ||||| || |||||||| || |||||| Sbjct 35634 CCGCCACGCAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAG 35693 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | || ||||| || || Sbjct 35694 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGG 35753 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| |||||||| || |||||||| | || || || Sbjct 35754 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGGACTCGACC 35813 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || || ||||||||||||||||| |||||||| Sbjct 35814 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 35860 >seq9 Length=228969 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||||| || || | ||||| || | |||||| |||||||| || Sbjct 118297 TTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 118356 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 | || ||||| || || || || || |||||||| || ||||| ||||||||| ||| Sbjct 118357 AATCGCTGTTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 118416 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| | || || || || | |||||| || || ||||| || ||||| ||||| Sbjct 118417 ATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCCGTCAGAGTCTTCACGAA 118475 >seq2 Length=396018 Score = 109 bits (120), Expect = 1e-18 Identities = 189/268 (71%), Gaps = 5/268 (2%) Strand=Plus/Minus Query 275303 GGTTTCAATATC-TCGTGCGCGACAACCGGCCGCATATGAAGAAGGCCGGCAACCTCCGG 275361 ||||||||| | | ||||| || | || || | |||||||||| || ||||||||| Sbjct 59045 GGTTTCAATTACATTGTGCGGGATGATCGACCTCGATTGAAGAAGGCAGGTAACCTCCGG 58986 Query 275362 TCCGCCTTTACCAAGACAGACGGCGAATTCTTTGTCATCTTTGACGCCGACTTCTGCCCA 275421 | || ||||| |||||| || || || ||||||||||||||||| |||||||| || Sbjct 58985 TGGGCATTTACACGGACAGATGGAGACTTTTTTGTCATCTTTGACGCAGACTTCTGTCCT 58926 Query 275422 AGGCCCGACTTCCTCGAGGAGACACTTGGC-AGGATGAAGGCAGATCCCACGATTGCCAT 275480 | || |||||| || | ||| | | | || | | | ||| || ||| ||||| Sbjct 58925 CGACCAGACTTCATCAAAGAGCTTATCGTCGAGCACCTTGAC-GATGACAAGATCGCCAT 58867 Query 275481 CTTCCAAACTCCCCAGTTCTTCGAGCAGCGCA-ATGAGCAGAACTACGTGGAGAAGGGAG 275539 |||| | ||| ||||| ||| | | || ||||||||| | || ||| |||| | Sbjct 58866 TGTCCAGAGTCCACAGTTTTTC-CGTGTCACAGATGAGCAGACGTGGGTTGAGCAGGGGG 58808 Query 275540 CCGGCGCCGTCCAGGAGCTCTTCTATCG 275567 |||| || || ||||||||||| || Sbjct 58807 CCGGTGCTACGCAAGAGCTCTTCTACCG 58780 >seq7 Length=232781 Score = 105 bits (116), Expect = 1e-17 Identities = 433/670 (65%), Gaps = 37/670 (6%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 ||||| || ||||||| || ||| ||||||||||||| || || ||| ||||| Sbjct 206937 CGCCATTGAATGTACTCCGAAGGCGTCTTGTCCAGGTGGTTATCGATGTGGGCAAAAGCG 206996 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA-CAGAGCCCCGAGTCGG 225099 ||||| | |||||| || || ||||| ||| ||| | | | || || || Sbjct 206997 TGCTGCTTGATGTACGCAATACGGATGTTCTCGTGCGACCAGATCTCACCCTCGGTGGGG 207056 Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159 | || || ||| ||| || |||| || |||| |||||| ||||| ||||| || || Sbjct 207057 ATCAGC-TCACCGCAGAGAACGTTGACCAGGGTAGACTTGCCGGCACCGTTGGGACCGAT 207115 Query 225160 CACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGG--- 225216 ||| |||| ||||| || | ||| || | | || | ||| |||| || Sbjct 207116 GACGGCAATACGGGAGCCCAGGGAGCACTGGAAGGTGATGT--CCGAA-ATCTGGGGCTT 207172 Query 225217 --GCCAGTTTGG-TAAGCAAAGGCCAC------GCCACGCAGCTTCATGATGGCACGGTC 225267 | ||| || || ||| ||| | ||||||| ||| || | | Sbjct 207173 GGGGGTGTTGGGGTACTGGAAGCCCATCTTGTTGGCACGCAG------GATAGCCTTGGC 207226 Query 225268 CTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTC 225327 ||||| | | ||| || ||||| || ||||| ||||| ||| || | | | Sbjct 207227 CTTGGTCTTGACACCATCGAGGAAACCAGGCTCAGGGAAGGAGAACTCCATCTCGGATGC 207286 Query 225328 CTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCC--ACGAAAGCAGACAGGTTT 225385 ||| ||| |||| || || |||| | | |||| ||||| | |||||| Sbjct 207287 GCCCAGCTCGAAGTACGACTTGGCAGCGGG--GTTCTGCCTCACGAAGTCCTCCAGGTTG 207344 Query 225386 CCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCG 225445 || || | || ||||||||| | || |||| | || || | |||||| | Sbjct 207345 CCCTTGTACGTCTTGAGCTTGAAGCGCT---CGTAGTTGACGATGTACTGGCACACGCGG 207401 Query 225446 TCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAGGCCCTTGAG 225504 | ||||| ||||||||||| || || |||||||||| || || | | |||||| Sbjct 207402 TTCAGGAAACCAGAGTCGTGAGAGACCATGATGGACGTGCATGTGCT----GTTCTTGAG 207457 Query 225505 GTGCGTGAT-GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAA 225563 || || | |||||| || ||||| |||| |||| |||||| || || |||||||| | Sbjct 207458 GTA-GTCCTCGAGCCAGGCAACGTTCTTGACATCCAGGTGGTTGGTGGGCTCGTCCAGCA 207516 Query 225564 GCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCC 225623 |||| ||||| | | || | ||| || |||| ||||||||| ||||| || | Sbjct 207517 GCAGAATGTCGGGGTTCTCGAAAACGGCACGGCACAGAGCCAGCTTCATCTTCCAACCAC 207576 Query 225624 CGGACAGGGA 225633 |||||||||| Sbjct 207577 CGGACAGGGA 207586 >seq2236 Length=43962 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || |||||||| | |||||||||||| ||| | |||||||| |||| | || | | Sbjct 35607 TAGCGCCACTGCAGGTACTGGTTGGGCGTCTTCTCCAGGTGCATCTCGACGTGTTCCAGG 35666 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097 || ||||| | ||| | || |||| ||||| |||||| || || | | Sbjct 35667 GCGTGCTGCTTGATGTATCCGATACGCAGATTGGGGTGCTTCTCGACCTTTCCGGTACTT 35726 Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157 || | |||||||||||| | ||||||||| || | |||||| ||||| ||||| ||| Sbjct 35727 GGGATGGTCTCGCCGGTGAGCAGCTTGATGAGAGTCGACTTGCCAGCACCGTTGGGACCA 35786 Query 225158 AT 225159 || Sbjct 35787 AT 35788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921592746799280