Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1883 120 3e-22 >seq1883 Length=75506 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| |||| | || || || || | |||||| || || || |||||||| || | Sbjct 35633 ACCGCCACGCAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 35692 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| | || || ||||||||||| || |||| || ||||||||||| ||||| Sbjct 35693 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCCGGAGG 35752 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| ||| || | || ||| || || || Sbjct 35753 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGGACTCGAC 35812 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | ||| | |||||||||||| | || || ||||| || ||||| || Sbjct 35813 CTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATCTT 35863 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| | || | |||||| || || ||||||||||| || | | || || ||||| Sbjct 35193 AGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGACAGCGTCCGGCCGTCT 35252 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| | || || ||||||||||| || ||||| || || || ||| Sbjct 35253 TCCAGCTGCTTGCCCGCAAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCT 35312 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || | ||||| || | || | ||| Sbjct 35313 TGAATCTTGGCCTTCACGTTGTCGATCGTGTCCGATGATTCCACCTCGAGGGTGATCGTC 35372 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| |||| || || ||||| |||||||| Sbjct 35373 TTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 35404 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | || || || || | ||| || || || || |||||||| || | Sbjct 35405 ACCACCGCGGAGACGGAGGACAAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGA 35464 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| |||| ||||||||||| ||||| | ||||| |||||||| || ||||| Sbjct 35465 CAGAGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGG 35524 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| || || | || || | ||||| Sbjct 35525 GATACCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGACGACTCCAC 35584 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||||| | ||| || ||||| || ||||| Sbjct 35585 CTCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 35632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499628723928560