Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq17 205 9e-48 seq1883 125 7e-24 seq5 100 3e-16 seq9 87.8 2e-12 >seq17 Length=201905 Score = 205 bits (226), Expect = 9e-48 Identities = 965/1515 (64%), Gaps = 46/1515 (3%) Strand=Plus/Minus Query 153030 TTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAGGT 153089 ||||| ||||| |||||||| || | ||| || | | ||| | ||| || | || Sbjct 89052 TTGACAACTTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGC 88993 Query 153090 TCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACC 153149 |||||| | ||||| ||||| || || || | || | || || |||||| ||||| | Sbjct 88992 TCAAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATC 88933 Query 153150 AACAAAGAATTCCGCAAGCCGTGC-GCTCGAATGTCGTCCTTCAACGCCTGCCAATCCCA 153208 ||||| || || | |||||| ||| || | | | ||||||| || | ||| ||||| Sbjct 88932 AACAAGCTGTTGCGGACACCGTGCTGCTTGA-TCTTGGCCTTCAAGGCGTCCCAGTCCCA 88874 Query 153209 CAGCGCCGACGGTGTCGC---GTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGG 153265 || | || || | | |||||||||||||||||| | | || | | |||| Sbjct 88873 GAGATCAGAGGGCTTGACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGG 88814 Query 153266 ACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAG 153325 | || | | | |||| ||| || | ||| | || || || ||| Sbjct 88813 AGATCCCTCGTATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAG 88754 Query 153326 CGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTC 153385 ||| | | ||| ||||| ||| ||| || || || || | || || ||| Sbjct 88753 GGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACTC 88694 Query 153386 GTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGG 153445 | | |||||||| || || || || |||||||||||||||| || ||||| || || Sbjct 88693 GAAAGGCATGCGGAGGGCCAAGAAAGCATCGGCCAGACCCTGGACGCCCACGCCAATAGG 88634 Query 153446 TCGATGCTTCTCGTTGCTGCGCCTCGCG---CTC-GCTATGGGATAGTGATTGCGATCGA 153501 || || | |||||| || ||| ||| | | |||||||| ||| ||||| Sbjct 88633 ACGGTGGCGCATGTTGCT----CTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCGA 88578 Query 153502 TAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCAT 153561 | || ||||| |||||||| || || || | || | | | || || ||| | || Sbjct 88577 TGATCTTGTTCAGGTTGCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGTTAT 88518 Query 153562 AGG--TCATT-TCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGA 153618 || ||||| |||| | || ||| | | || ||| ||||||||||| || |||| Sbjct 88517 AGCGCTCATTCTCGTAGTCG---ACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGA 88461 Query 153619 CGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTA 153678 | || ||| || | | |||| | |||||| | ||| |||||| || | Sbjct 88460 CAGCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAA 88401 Query 153679 TGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCG-TCTTTGAAGAGCATGTAC 153737 || ||| | || | ||| ||||| ||||| ||| || | || ||| | | |||| | Sbjct 88400 TGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGG-CGTGATCCTTGTACAACATGAAG 88342 Query 153738 GGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGTCCTGCGCTCGC 153794 || ||| |||||| ||| | |||| ||| | ||| || | |||||| | Sbjct 88341 GGGTTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGC---TTCTGCGCCTTC 88285 Query 153795 ACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCG 153854 | || | ||| ||||||| |||||| ||||||||| ||| ||||| ||| Sbjct 88284 AGGGTCTTTTGGCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCG 88225 Query 153855 CCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCG 153914 |||||||||||||| |||||||| |||| | || |||||||| | ||| |||| Sbjct 88224 CCGTAGCAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCA------GTCG 88171 Query 153915 GCGTT------GACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCG 153968 |||| || || |||||| |||||||| | |||||| || | |||||| Sbjct 88170 CCGTTCTTCTCCACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCA 88111 Query 153969 CGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGA-GCACGCTATAGATGTC 154027 || || | || ||| || ||| ||| | || | || | | ||| || Sbjct 88110 CGAGCACGGACCTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGA-AGACATC 88052 Query 154028 GGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATC 154084 |||||||| || || | ||||| ||| | ||||| ||| || || |||||||| Sbjct 88051 AGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATC 87992 Query 154085 GACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCC 154144 ||||| || | | ||||||||||| |||| ||| || | ||| | | ||||| Sbjct 87991 GACGTATCGGGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCC 87932 Query 154145 GTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCC 154204 |||||| | ||| | | |||| ||| || | | || ||||| | |||||||| Sbjct 87931 GTTGGTGCCAGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGACCAATGCC 87872 Query 154205 GCC-GCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGC 154263 || ||| | ||| || || || ||| ||| || |||||||| || |||| Sbjct 87871 TCCAGCCAT-CTTGGAGATCATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGC 87813 Query 154264 TATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCG 154323 | || || | | | | | ||| ||||| ||| |||| |||| || || Sbjct 87812 TGTCCTCCTTCATGTCAACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCAT 87753 Query 154324 AAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGA 154383 || || || || |||||| || || | || | | ||| | ||| || || | Sbjct 87752 TGAACAGCGTTGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAA 87693 Query 154384 TGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCG 154443 | ||||| | || || ||||| | ||||| ||||| ||||||||||| | Sbjct 87692 GAACCCTCTCGATGTTGTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTG 87633 Query 154444 GACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGGTTTTGTAAC 154503 | || ||| ||||| || || | || | |||||| | |||||||| ||| | | Sbjct 87632 GCCGCTCGACGACTTTACCGTTGAGTTTGAGGAGATACGAACGCTCGAGGGTCTTGAAGC 87573 Query 154504 CGAAATACTTGTATT 154518 | || || | |||| Sbjct 87572 CAAAGTATTGATATT 87558 >seq1883 Length=75506 Score = 125 bits (138), Expect = 7e-24 Identities = 144/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| || ||| || |||||| || || || |||| Sbjct 35439 GACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCCTCAAGCTGCTTTCCGGCG 35498 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| || |||||||| ||||| || ||||| ||| || || | Sbjct 35499 AAGATGAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACG 35558 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| |||||||||||||| || | ||| || || || ||||| || Sbjct 35559 TTGTCGATGGTGTCGGACGACTCCACCTCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTG 35618 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 35619 ACGAAGATCTGCAT 35632 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||||| || || || | | |||||||| |||||||||||||| | Sbjct 35178 CCACCACGCAGACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGAC 35237 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||| || || || || || | | |||| |||||||| ||||| || || Sbjct 35238 AGCGTCCGGCCGTCTTCCAGCTGCTTGCCCGCAAAGATAAGACGCTGCTGGTCTGGGGGA 35297 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| ||| | || | || | ||| || | ||||| | || |||| Sbjct 35298 ATACCCTCCTTGTC-TTGAATCTTGGCCTTCACGTTG-TCGATCGTGTCCGATGATTCCA 35355 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | ||| || || ||||| || || || || || ||||| Sbjct 35356 CCTCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 35404 >seq5 Length=272196 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| |||| || | || | | | |||||||| || ||||| |||||| Sbjct 174135 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGAG 174194 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||||||| || || || | |||| || ||||||||||| || || Sbjct 174195 AGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGA 174254 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || ||||| ||| || || | |||| || | |||||||| |||||||| Sbjct 174255 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTG-TCGATGGTGTCGGAAGACTCCAC 174313 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || || || || || || || || || ||||||||| Sbjct 174314 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 174362 >seq9 Length=228969 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||| | ||| || ||||| || || || |||| ||| Sbjct 118295 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 118354 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544 | | |||||||| |||||||| ||||| || ||||| ||| || || | | | Sbjct 118355 TCAATCGCTGTTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 118414 Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604 | | |||||||| ||||||||||| | || | || ||||| |||||||| || || | Sbjct 118415 CGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCCGTCAGAGTCTTCACGA 118474 Query 138605 A 138605 | Sbjct 118475 A 118475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496246432757280