Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq17 282 5e-71
seq1610 123 3e-23
>seq17
Length=201905
Score = 282 bits (312), Expect = 5e-71
Identities = 1108/1717 (65%), Gaps = 39/1717 (2%)
Strand=Plus/Minus
Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585
|||||||||| || ||| |||| || |||||||||||||| || |||||||| |
Sbjct 89390 TGAACTGAATCGGCGCTGCCGCTGCCTGTGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 89331
Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTC-CATG 115644
|| ||||||| | | ||||| | | |||| | | || || | ||||
Sbjct 89330 CCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAAGG-CTCACGCATG 89272
Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704
| ||||| ||||| || ||||||||| || ||||| || ||||| | |
Sbjct 89271 TGTATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAGCCATCTGCACG 89212
Query 115705 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 115764
| | || | ||| ||||| || || |||||||| ||| || |||||||||||
Sbjct 89211 ATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCATCTGGGATG 89152
Query 115765 TCCACGA-TATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTGA 115823
| ||| |||| |||||||||||| | | || ||| | | ||||| |||| ||
Sbjct 89151 -CTGCGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCTTCAGGTCCTCAGA 89093
Query 115824 CCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACC 115883
||| |||||| || | ||||||| | || ||||||||| ||||| ||
Sbjct 89092 CCACAGACCACACTGCACCAGATCCTTGAGCAGCCATGGATTGACAACTTGGAACTCGCC 89033
Query 115884 CGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACC 115943
||||| ||| | | |||||||||||| || || |||||||||||||| ||||| ||
Sbjct 89032 AGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAGCACTCGTTGTTGCC 88973
Query 115944 CAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACC 116003
|| ||| || | || ||||| ||||||||||| ||||| | | ||||||||||| |||
Sbjct 88972 CAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCTGTTGCGGACACC 88913
Query 116004 CACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAG----TTGAGCTTTGTCTCCC 116059
| | | || |||| | |||||||||||| || ||| | | |
Sbjct 88912 GTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCCAGAGATCAGAGGGCT-TGACAT 88854
Query 116060 CCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCAT 116119
| |||||| || |||| |||||||| ||||| | || |||||||| ||| |
Sbjct 88853 TGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGGAGATCCCTCGTATGATGAGT 88794
Query 116120 ATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCT 116179
| ||||| ||||||| || | || | || |||||| ||||| || || ||||
Sbjct 88793 AGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGGGCGGCGTGGTAGATGGTCT 88734
Query 116180 CAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATC-AAACGC--GAGACGGCACA 116236
| || || | |||| | ||||| || || ||| || | | || ||
Sbjct 88733 CGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACTCGAAAGGCATGCGGAGGGCCA 88674
Query 116237 AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAG 116296
| || |||| || ||||| ||||| || | |||||| || || || | ||| ||
Sbjct 88673 A---GAAAGCATCGGCCAGACCCTGGACGCCCACGCCAATAGGACGGTGGCGCATGTTGC 88617
Query 116297 ACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTT 116353
||| || || |||| || ||||| || ||||||| | | | || || ||
Sbjct 88616 TCTTGCG---GGCCTCCGGAACAGGATAGTGGTTGATATCGATGATCTTGTTCAGGTTGC 88560
Query 116354 TGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT 116413
||| |||| |||| ||| || ||| | | | | | | | | |||| | |
Sbjct 88559 GAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGTTATAGCGCTCATTCTCGTAGT 88500
Query 116414 TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 116473
||| ||| || |||||||| |||||||| || || |||| ||| || | |||
Sbjct 88499 CGACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACAGCAACCTCGTCAGGAGCAG 88440
Query 116474 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 116533
||||| || || || || || | || || || ||||||||| | |||||| || |
Sbjct 88439 AATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGTGCCAAGGTTCTTCTGGT 88380
Query 116534 TTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGG 116593
| ||| ||| ||||||||| | ||| | || | || ||||| ||||| |
Sbjct 88379 TGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAGGGGTTGCCTGTCTCGGTTTGAG 88320
Query 116594 ACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTT--GGCTCGCCCCT 116650
|| ||| || || | ||| | | || ||| || ||| | | || | | || ||||
Sbjct 88319 CCTCGAGGATGGCATACCAGAGCTTCTGCGCCT---TCAGGGTCTTTTGGCCGCGACCCT 88263
Query 116651 CCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGAGCCCT 116709
| ||||||||| ||| || ||||| ||||| || || ||| || | || ||
Sbjct 88262 CGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTC-GCCGTAGCAGTCGGCAAGGCCG 88204
Query 116710 GGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAG 116769
|| || | || || | |||| ||| | || || ||| || ||||||||||||
Sbjct 88203 GGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCCACACGCTTCATGAAG 88144
Query 116770 AGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGA 116829
|| || ||||||||||| || |||||| || ||| || | ||||| | || ||
Sbjct 88143 AGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCGTGG 88084
Query 116830 TTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCG 116889
|| |||| || | || || | || ||| |||||||| || |||||||| | ||
Sbjct 88083 TTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCA 88024
Query 116890 ATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACG 116946
| | || ||| | ||| |||| | || || | || || ||| || ||
Sbjct 88023 AAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACA 87964
Query 116947 CGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGT 117004
|| | ||| || ||||| |||| || ||| || || || ||| || ||| | |
Sbjct 87963 CGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAGCC--GG 87906
Query 117005 TGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGC 117064
|||| | || ||||| || | |||||| || || ||| ||| ||||| || |
Sbjct 87905 TGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCAGCCATCTTGGAGATCATGGCAC 87846
Query 117065 ACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGC 117124
| | | || | | ||||| || || || ||| |||| | | | ||||||||
Sbjct 87845 AGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGGAAGC 87786
Query 117125 AGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGA 117184
| ||||| || | | || || || || ||||| || ||||| | |||||| |||
Sbjct 87785 ACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGTGTGA 87726
Query 117185 ACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGA 117220
| | || | | |||||| | | |||||||| |||||
Sbjct 87725 AGA-ACTTGTTGGACATGTAGTTGTAGGTCT-CAAGA 87691
>seq1610
Length=70883
Score = 123 bits (136), Expect = 3e-23
Identities = 299/444 (67%), Gaps = 8/444 (2%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| || || ||||||||||||||||| |||||||| | ||| ||| ||||||||
Sbjct 62466 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTCCCGCCAAGGGAGATGTTCTCCAT 62407
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGT-TGGCACCCCAATCTGTTTGAGGAGAC 127349
|| || || ||||| | || || | || | | | || | | ||||||||
Sbjct 62406 GAAGTCGAAAGGGTTAGTAGACTTGTAGATCTTCTCGTTGCCGAGAGCGAC-GAGGAGAC 62348
Query 127350 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 127409
| || | |||| | || ||||||| |||| | | ||||| |||| ||| ||
Sbjct 62347 GGTCGGCGACGAATTCGATGTACTGCTTCATCAAGTTGGCATTCATGCCGAGTAGGGCAC 62288
Query 127410 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGT 127469
| || | || || | |||| ||||||||||| | ||||| || | |||||| |
Sbjct 62287 AGGGCAAGGCCTCGGTCAGGAACTCCTTCTCAATGGCAACAGCATCGGTAATGATGGCTT 62228
Query 127470 GAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCA-CAG-CAAACT 127526
| | | | || | ||| | | || | ||| || | | ||| | || |
Sbjct 62227 CCACGCGCTGCTTGCTGGGGCGGTTGT-TCAGGTGTGAGAACAG--CAAGCAGGCGAAGT 62171
Query 127527 CTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGA 127586
| ||| |||||||||||||| ||||||||||| || |||||| ||| || ||||| |
Sbjct 62170 CAGTGTGCAGACCCTCGTCACGAGAGATGAGTTCGTTGGAGAAGGTCAGGCCAGGCATCA 62111
Query 127587 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCA 127646
|||| |||||||||| |||||| || | | || | |||| |||||| || || || |
Sbjct 62110 GACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAAGCGCCACTGAAGAAAATACCTTCGA 62051
Query 127647 CACACGCGAACGCAAATAGACGCT 127670
|| || || |||| || ||||
Sbjct 62050 CAGCAGCAAATGCAACAAGGCGCT 62027
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613487460405840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |