Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq17 282 5e-71 seq1610 123 3e-23 >seq17 Length=201905 Score = 282 bits (312), Expect = 5e-71 Identities = 1108/1717 (65%), Gaps = 39/1717 (2%) Strand=Plus/Minus Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585 |||||||||| || ||| |||| || |||||||||||||| || |||||||| | Sbjct 89390 TGAACTGAATCGGCGCTGCCGCTGCCTGTGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 89331 Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTC-CATG 115644 || ||||||| | | ||||| | | |||| | | || || | |||| Sbjct 89330 CCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAAGG-CTCACGCATG 89272 Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704 | ||||| ||||| || ||||||||| || ||||| || ||||| | | Sbjct 89271 TGTATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAGCCATCTGCACG 89212 Query 115705 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 115764 | | || | ||| ||||| || || |||||||| ||| || ||||||||||| Sbjct 89211 ATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCATCTGGGATG 89152 Query 115765 TCCACGA-TATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTGA 115823 | ||| |||| |||||||||||| | | || ||| | | ||||| |||| || Sbjct 89151 -CTGCGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCTTCAGGTCCTCAGA 89093 Query 115824 CCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACC 115883 ||| |||||| || | ||||||| | || ||||||||| ||||| || Sbjct 89092 CCACAGACCACACTGCACCAGATCCTTGAGCAGCCATGGATTGACAACTTGGAACTCGCC 89033 Query 115884 CGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACC 115943 ||||| ||| | | |||||||||||| || || |||||||||||||| ||||| || Sbjct 89032 AGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAGCACTCGTTGTTGCC 88973 Query 115944 CAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACC 116003 || ||| || | || ||||| ||||||||||| ||||| | | ||||||||||| ||| Sbjct 88972 CAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCTGTTGCGGACACC 88913 Query 116004 CACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAG----TTGAGCTTTGTCTCCC 116059 | | | || |||| | |||||||||||| || ||| | | | Sbjct 88912 GTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCCAGAGATCAGAGGGCT-TGACAT 88854 Query 116060 CCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCAT 116119 | |||||| || |||| |||||||| ||||| | || |||||||| ||| | Sbjct 88853 TGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGGAGATCCCTCGTATGATGAGT 88794 Query 116120 ATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCT 116179 | ||||| ||||||| || | || | || |||||| ||||| || || |||| Sbjct 88793 AGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGGGCGGCGTGGTAGATGGTCT 88734 Query 116180 CAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATC-AAACGC--GAGACGGCACA 116236 | || || | |||| | ||||| || || ||| || | | || || Sbjct 88733 CGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACTCGAAAGGCATGCGGAGGGCCA 88674 Query 116237 AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAG 116296 | || |||| || ||||| ||||| || | |||||| || || || | ||| || Sbjct 88673 A---GAAAGCATCGGCCAGACCCTGGACGCCCACGCCAATAGGACGGTGGCGCATGTTGC 88617 Query 116297 ACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTT 116353 ||| || || |||| || ||||| || ||||||| | | | || || || Sbjct 88616 TCTTGCG---GGCCTCCGGAACAGGATAGTGGTTGATATCGATGATCTTGTTCAGGTTGC 88560 Query 116354 TGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT 116413 ||| |||| |||| ||| || ||| | | | | | | | | |||| | | Sbjct 88559 GAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGTTATAGCGCTCATTCTCGTAGT 88500 Query 116414 TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 116473 ||| ||| || |||||||| |||||||| || || |||| ||| || | ||| Sbjct 88499 CGACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACAGCAACCTCGTCAGGAGCAG 88440 Query 116474 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 116533 ||||| || || || || || | || || || ||||||||| | |||||| || | Sbjct 88439 AATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGTGCCAAGGTTCTTCTGGT 88380 Query 116534 TTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGG 116593 | ||| ||| ||||||||| | ||| | || | || ||||| ||||| | Sbjct 88379 TGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAGGGGTTGCCTGTCTCGGTTTGAG 88320 Query 116594 ACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTT--GGCTCGCCCCT 116650 || ||| || || | ||| | | || ||| || ||| | | || | | || |||| Sbjct 88319 CCTCGAGGATGGCATACCAGAGCTTCTGCGCCT---TCAGGGTCTTTTGGCCGCGACCCT 88263 Query 116651 CCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGAGCCCT 116709 | ||||||||| ||| || ||||| ||||| || || ||| || | || || Sbjct 88262 CGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTC-GCCGTAGCAGTCGGCAAGGCCG 88204 Query 116710 GGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAG 116769 || || | || || | |||| ||| | || || ||| || |||||||||||| Sbjct 88203 GGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCCACACGCTTCATGAAG 88144 Query 116770 AGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGA 116829 || || ||||||||||| || |||||| || ||| || | ||||| | || || Sbjct 88143 AGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCGTGG 88084 Query 116830 TTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCG 116889 || |||| || | || || | || ||| |||||||| || |||||||| | || Sbjct 88083 TTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCA 88024 Query 116890 ATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACG 116946 | | || ||| | ||| |||| | || || | || || ||| || || Sbjct 88023 AAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACA 87964 Query 116947 CGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGT 117004 || | ||| || ||||| |||| || ||| || || || ||| || ||| | | Sbjct 87963 CGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAGCC--GG 87906 Query 117005 TGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGC 117064 |||| | || ||||| || | |||||| || || ||| ||| ||||| || | Sbjct 87905 TGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCAGCCATCTTGGAGATCATGGCAC 87846 Query 117065 ACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGC 117124 | | | || | | ||||| || || || ||| |||| | | | |||||||| Sbjct 87845 AGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGGAAGC 87786 Query 117125 AGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGA 117184 | ||||| || | | || || || || ||||| || ||||| | |||||| ||| Sbjct 87785 ACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGTGTGA 87726 Query 117185 ACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGA 117220 | | || | | |||||| | | |||||||| ||||| Sbjct 87725 AGA-ACTTGTTGGACATGTAGTTGTAGGTCT-CAAGA 87691 >seq1610 Length=70883 Score = 123 bits (136), Expect = 3e-23 Identities = 299/444 (67%), Gaps = 8/444 (2%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| || || ||||||||||||||||| |||||||| | ||| ||| |||||||| Sbjct 62466 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTCCCGCCAAGGGAGATGTTCTCCAT 62407 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGT-TGGCACCCCAATCTGTTTGAGGAGAC 127349 || || || ||||| | || || | || | | | || | | |||||||| Sbjct 62406 GAAGTCGAAAGGGTTAGTAGACTTGTAGATCTTCTCGTTGCCGAGAGCGAC-GAGGAGAC 62348 Query 127350 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 127409 | || | |||| | || ||||||| |||| | | ||||| |||| ||| || Sbjct 62347 GGTCGGCGACGAATTCGATGTACTGCTTCATCAAGTTGGCATTCATGCCGAGTAGGGCAC 62288 Query 127410 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGT 127469 | || | || || | |||| ||||||||||| | ||||| || | |||||| | Sbjct 62287 AGGGCAAGGCCTCGGTCAGGAACTCCTTCTCAATGGCAACAGCATCGGTAATGATGGCTT 62228 Query 127470 GAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCA-CAG-CAAACT 127526 | | | | || | ||| | | || | ||| || | | ||| | || | Sbjct 62227 CCACGCGCTGCTTGCTGGGGCGGTTGT-TCAGGTGTGAGAACAG--CAAGCAGGCGAAGT 62171 Query 127527 CTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGA 127586 | ||| |||||||||||||| ||||||||||| || |||||| ||| || ||||| | Sbjct 62170 CAGTGTGCAGACCCTCGTCACGAGAGATGAGTTCGTTGGAGAAGGTCAGGCCAGGCATCA 62111 Query 127587 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCA 127646 |||| |||||||||| |||||| || | | || | |||| |||||| || || || | Sbjct 62110 GACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAAGCGCCACTGAAGAAAATACCTTCGA 62051 Query 127647 CACACGCGAACGCAAATAGACGCT 127670 || || || |||| || |||| Sbjct 62050 CAGCAGCAAATGCAACAAGGCGCT 62027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613487460405840